Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3587 ATGGCTTCTGATCTTCAAGCGAGGGCCAAAGAGGCATTCGTCGATGAAGACTATGATCTCGCGATGGACCTTCTCACTAAGGCCATCGCTTTTGAATCTAACAACGCTCAATACTATGCCGATCGTGCCCAAGCCAACATCAAACTCAACAACCTCGCTGAGGCTGTTGCTGATGCAAACATGGCAATTGAGTTGAATCCTTCTCTCCCAAAAGCATATTTGCGGAAAGGTACTGCATGCATGAAGCTTAAGGAATATCAGACAGCTAAGGCAGCTCTAGAGATGGGTGCTTCATTGGCTCCAGGGGATTCAAAATTCATTGATATGCTCAAACAATGTCATGAGCTCATTGCTGAAGAATCTGATGTCACACCTATAATACCAGAAAAGCACACGACAACTCGGGGTGTTTCTGCCAAAGAACTTGAGCAAGTGAATGACGTTTCACAGCAGATGACAATAGCAGTTGCTAAACCTAAATACAGGCATGAATTCTACCAAAAACCTGATGAGGTGGTGGTTACCATTTTTGCAAAGGGCATTCCACGGGACAGCGTGACTGTTGATTTTGGTGAACAAATACTAAGTGTTAGAATCGATGTACCTGGTGAGGATGCATATGCTCTTCAACCTCGCTTGTTTGGAAAGATCGTACCTTCCAGATGCCGATATGAAGTTTTGTCTACCAAGATGGAAATCCGGCTTGCAAAAGCAGAACCTATCCACTGGGCAGCTCTTGAATTCCGTGGAGGTGCAACAGTTCCACAGAGGGCTATTGTTTCATCAGTTATCAACGTTCAAAGGCCTACTTACCCTTCCTCTAAACCAAAAAGAGTAGATTGGGATAAGCTGGAAGCTCAAGTTAAGAAAGAGGAAAAAGATGAAAAGCTTGATGGTGACGCAGCGCTGAACAAATTCTTCCGCCAGATATATCAAGATGCAGATGAGGACACCAGAAGAGCAATGAGCAAATCATTTGTGGAGTCTAATGGAACCGTACTGTCCACAAACTGGAAAGAAGTGGGATCCAAGAAGGTTCAGGGAAGTGCTCCTGATGGCATGGAGTTGAAGAAATGGGAATATTAG 1086 0.4438 MASDLQARAKEAFVDEDYDLAMDLLTKAIAFESNNAQYYADRAQANIKLNNLAEAVADANMAIELNPSLPKAYLRKGTACMKLKEYQTAKAALEMGASLAPGDSKFIDMLKQCHELIAEESDVTPIIPEKHTTTRGVSAKELEQVNDVSQQMTIAVAKPKYRHEFYQKPDEVVVTIFAKGIPRDSVTVDFGEQILSVRIDVPGEDAYALQPRLFGKIVPSRCRYEVLSTKMEIRLAKAEPIHWAALEFRGGATVPQRAIVSSVINVQRPTYPSSKPKRVDWDKLEAQVKKEEKDEKLDGDAALNKFFRQIYQDADEDTRRAMSKSFVESNGTVLSTNWKEVGSKKVQGSAPDGMELKKWEY* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3587 361 ProSiteProfiles CS domain profile. 158 247 IPR007052 -
Ahy19g3587 361 Pfam CS domain 162 237 IPR007052 -
Ahy19g3587 361 SUPERFAMILY TPR-like 5 117 IPR011990 GO:0005515
Ahy19g3587 361 CDD p23_CS_SGT1_like 164 247 - -
Ahy19g3587 361 Pfam SGS domain 280 359 IPR007699 -
Ahy19g3587 361 SUPERFAMILY HSP20-like chaperones 157 255 IPR008978 -
Ahy19g3587 361 Gene3D - 159 248 IPR008978 -
Ahy19g3587 361 SMART tpr_5 70 103 IPR019734 GO:0005515
Ahy19g3587 361 SMART tpr_5 36 69 IPR019734 GO:0005515
Ahy19g3587 361 SMART tpr_5 2 35 IPR019734 GO:0005515
Ahy19g3587 361 ProSiteProfiles SGS domain profile. 270 361 IPR007699 -
Ahy19g3587 361 Gene3D Tetratricopeptide repeat domain 1 149 IPR011990 GO:0005515
Ahy19g3587 361 Coils Coil 42 62 - -
Ahy19g3587 361 PANTHER PHOSPHATASE-RELATED 1 361 - -
Ahy19g3587 361 Pfam Tetratricopeptide repeat 71 101 IPR019734 GO:0005515
Ahy19g3587 361 Pfam Tetratricopeptide repeat 36 68 IPR019734 GO:0005515
Ahy19g3587 361 PANTHER PROTEIN SGT1 HOMOLOG 1 361 IPR044563 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3587 Ahy-Chr19 158488275 158490855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3587 K12795 - gmx:100780174 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3607 15 158809367 158813767 Ahy19g3587 19 158488275 158490855 ECH
Ahy19g3587 19 158488275 158490855 Ahy19g3587 19 158488275 158490855 ECH