Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3585 ATGATCACATTGAAAGATCATGATAATATCAAATATAATGAAATTGCATTCTGGATGTATGTTATTTCATGTGTGGTGCTTGTGATCCTTGCAGGTGTCACATCGGGCCTAGCACTAGGATTGTTATCATTCAGCCAAGTTGATCTTGAGGTTCTCATTAAGGCTGGCCGTCCTAAAGACAAAAAGAATGCAGAAAGGATTCTACCAGTTGTAAAGAATGGACATTTTGTATTGTGTACCCTCCTTTTAGGTAAATCACTGGCCATGGAGGCACTGCCAATCTTCATGGATCCAATCATGCCGCCTTGGCTTACTATTATTATATCAACTCCCCTGGTCACATTATTTGCAGAGATTGTGCCTCAAGCTGTATATTCTCGATACGGACTAACCTTAGGAGCACAAATGGCACCCTTTGTTCAACTGCTTCTTCTGATCTTCTTCCCTATATCCTATCCAGCTAGTAAGATCCTGGATTGGGCTCTAGGGAAGGAGCATTCAGTCCTGTTGAGAAGATCTGAGTTAAAAACATTTGTGGACTTGCATGCAGACATGGCAGGAAAAGGTGGAGAGTTGTCCTGTCATGAAGCCTCTATAATCACAGGTGCCATGGATTTGACTGATAAGACTGCCAAAGATGCAATGACACCAATATCTGAAACTTTTTCTCTTGATATAAATTCCAAACTGGACATGAATACAATGACATTGATCATGAACAAAGGGCATAGTCGTGTACCTCTATACTCTGGATACCCAAGTAACATCATTGGCCTTATATTGGTTAAGAATTTAATGTTCTGTCGTCCAGAAGATGAAACCCCAATCAAGAATCTGATTATCAGAAAAATTCCCAGGGTTTATGAAAATTGGCCACTGTATGAGATACTGAACCAATTCCAAAAGGGTCACAGCCATATGGCCATTGTTTTGAAATGTGAGAATGACTCAGAGAACAACAATGCTGTAGCCCATGCTGCCGGTGCGCCTACATTTCTCAACACACTCACTAATAAAATATCAAATGCAACACAAAATACTAAAGAATCCGATTCTTCCTTTGATCTGGAAAAGAGTCAGAGAGTTTGTATCTGTGAGTCCAGCGATATAGAATTTAATAGTCCAAGTCCAGCATTTCAGAAGATGATGATGGAGGCAGGCAATGAACAACATCAACATTCCAAAAAGTGGGAGGAAGAGAGTGGTTATACGATGTCACAAGAAGAAATACAAGTTCTTCCAACTGTTTTGGACGAGGAAGTGATAGGAATCATCACAATGGAGGATGTTATGGAGGAACTGTTGCAGGGGGACATACTGGATGAAACTGATGAATATGTTCATGTTCAAAAGAACATCAGGATTAACTTGCTGACTCCACGAAGATCATCCAGGAAAGGATCCGAGTCTAGTCTTCATTGA 1422 0.4044 MITLKDHDNIKYNEIAFWMYVISCVVLVILAGVTSGLALGLLSFSQVDLEVLIKAGRPKDKKNAERILPVVKNGHFVLCTLLLGKSLAMEALPIFMDPIMPPWLTIIISTPLVTLFAEIVPQAVYSRYGLTLGAQMAPFVQLLLLIFFPISYPASKILDWALGKEHSVLLRRSELKTFVDLHADMAGKGGELSCHEASIITGAMDLTDKTAKDAMTPISETFSLDINSKLDMNTMTLIMNKGHSRVPLYSGYPSNIIGLILVKNLMFCRPEDETPIKNLIIRKIPRVYENWPLYEILNQFQKGHSHMAIVLKCENDSENNNAVAHAAGAPTFLNTLTNKISNATQNTKESDSSFDLEKSQRVCICESSDIEFNSPSPAFQKMMMEAGNEQHQHSKKWEEESGYTMSQEEIQVLPTVLDEEVIGIITMEDVMEELLQGDILDETDEYVHVQKNIRINLLTPRRSSRKGSESSLH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3585 473 Gene3D - 356 442 IPR046342 -
Ahy19g3585 473 Gene3D - 196 333 IPR046342 -
Ahy19g3585 473 CDD CBS_pair_CorC_HlyC_assoc 210 311 IPR044751 -
Ahy19g3585 473 Pfam Cyclin M transmembrane N-terminal domain 24 184 IPR002550 -
Ahy19g3585 473 PANTHER CBS DOMAIN PROTEIN 9 469 - -
Ahy19g3585 473 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 9 469 IPR045095 GO:0010960
Ahy19g3585 473 ProSiteProfiles CNNM transmembrane domain profile. 13 196 IPR002550 -
Ahy19g3585 473 SUPERFAMILY CBS-domain pair 199 312 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3585 Ahy-Chr19 158478952 158482478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3585 K16302 - gmx:100791387 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3585 19 158478952 158482478 Ahy19g3585 19 158478952 158482478 ECH