Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3576 ATGGCTGACGTCACCAATACCACCCGGGACACCGTCATTGCCGCCGCTTCCGTCATCTTCTCCGCCGAATCCAGACCACAACCTCCCTCTCTTCCGAAAAAACACTGGGGAAGCTGTTGGAGCTCATATTGGTGTTTTGGATCTCATAAAACCAGCAAGAGAATTGGCCATGCTGTCAATGTTCCTGAACCTGTTGCACCATCAGGACAAGCTGCTCCTACTGCACCAAATTCTTCAACTGCCGTAGTAATGCCATTTGCTGTGCCTCCCTCTTCTCCTGCATCTGTTTTCCAATCCAATCCTTCATCTGCTATTCAGTCACCAGCTGGGCCGCTCTCACTCTCCTCTCTATCTGCAAATGCATTTTCTTCTGGTGGACCTGCATCTATCTTTACCATTGGTCCTTATGCCTATGAGACCCAGTTAGTCTCACCACCTGTGTTTTCTAACTTCACAACTGAACCATCTACTGCTTCTTTTACTCCGCCTCCTGAATCTGTGCATCAGACAACACCATCATCCCCTGAGGTTCCATTTGCTCAATTGGTGGCATCTTCTCTAGACCTGGCTCATAAAAACAGTGGTAGAAATCACAAGTTTGCATTGTTCAACTATGATTATCATTCTTATCAGCAATATCCTGGAAGCCCAGGTGGCCAACTCATCTCACCTGGATCAGTGATTTCAACTTCTGGCAGCTCTACCCCTTTCCCTGATAGACACCCAATTCTCGAGTTCCATAAAGAGGAATCATCAAAGTTCTTGAGTTCTGAACACTTCACAGGTCGTAAATGGAGTTCGAGACTTGGATCTGGATCCTTGACACCAGATGGTGCCGGGCAGAGTTCAAGACTAGGTTCAGGATCCGCGACACCAGATGTTGCAGGGCATGGTTCAAGACTAGGTTCGGGATCTTTGACACCAAATGTTACAGGACATGGTTCAAGACTAGATTCACAGCTTGGCTCTGGGTGTTTGACACCTGATGGGACGGGTTCAAATTCAAGGTTGAGTTCTGGCTCTCTGACACCTGTTCAGCTAGCTTCACAGCAGATTTCTGAGGCATCATCCCTTGCTAACTCAGGGAATGGGTGCCAAACTAATCCAGCAATTGTTGATCATAGAGTTTCATTTGAATTTACTGGGGAAGATGTTGCACGTTGTCTTGCAAATAAAGCAGGATCATTGCTGCGAAACACATCACAGTCTTCGCAAGGTATAGTGGGTGAGCACCCTGTTGACAAAGAAAGGATGCAAATAGACTCCAATACTTGTGCTTTATGTTCAGGGAAACCTTCAGATGATCAGACAGTCAATGCTCCGGGAGAAGGAGAGGAGCGTCGCTGTGAAAAGCATAACTCCTCTAATTCTTCCAAAGAGTTCAATTTTGACAGCAGAAAAGGGGTTACTGATGTTGTTGCCAGTGGCTCTGATTGGTGGACTAACAAGAAGGTTGCTGGAAAGGAAGGTAGATCAAGCAACAGTTGGGCTTTCTTTCCAATGCTGCAGCCAGAAAACAACTGA 1524 0.4659 MADVTNTTRDTVIAAASVIFSAESRPQPPSLPKKHWGSCWSSYWCFGSHKTSKRIGHAVNVPEPVAPSGQAAPTAPNSSTAVVMPFAVPPSSPASVFQSNPSSAIQSPAGPLSLSSLSANAFSSGGPASIFTIGPYAYETQLVSPPVFSNFTTEPSTASFTPPPESVHQTTPSSPEVPFAQLVASSLDLAHKNSGRNHKFALFNYDYHSYQQYPGSPGGQLISPGSVISTSGSSTPFPDRHPILEFHKEESSKFLSSEHFTGRKWSSRLGSGSLTPDGAGQSSRLGSGSATPDVAGHGSRLGSGSLTPNVTGHGSRLDSQLGSGCLTPDGTGSNSRLSSGSLTPVQLASQQISEASSLANSGNGCQTNPAIVDHRVSFEFTGEDVARCLANKAGSLLRNTSQSSQGIVGEHPVDKERMQIDSNTCALCSGKPSDDQTVNAPGEGEERRCEKHNSSNSSKEFNFDSRKGVTDVVASGSDWWTNKKVAGKEGRSSNSWAFFPMLQPENN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3576 507 MobiDBLite consensus disorder prediction 265 346 - -
Ahy19g3576 507 MobiDBLite consensus disorder prediction 440 457 - -
Ahy19g3576 507 MobiDBLite consensus disorder prediction 431 467 - -
Ahy19g3576 507 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 2 505 IPR040420 -
Ahy19g3576 507 MobiDBLite consensus disorder prediction 216 241 - -
Ahy19g3576 507 MobiDBLite consensus disorder prediction 265 289 - -
Ahy19g3576 507 MobiDBLite consensus disorder prediction 302 346 - -
Ahy19g3576 507 MobiDBLite consensus disorder prediction 216 237 - -
Ahy19g3576 507 MobiDBLite consensus disorder prediction 153 175 - -
Ahy19g3576 507 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 2 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3576 Ahy-Chr19 158406836 158410908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3576 - - gmx:100806399 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3561 15 158372350 158375747 Ahy19g3576 19 158406836 158410908 ECH
Ahy19g3576 19 158406836 158410908 Ahy19g3576 19 158406836 158410908 ECH
Ahy19g3576 19 158406836 158410908 Ahy9g2049 9 109000521 109004621 hybridization
Ahy15g3561 15 158372350 158375747 Ahy19g3576 19 158406836 158410908 PCT
Ahy5g3151 5 113320859 113324303 Ahy19g3576 19 158406836 158410908 PCT
Ahy19g3576 19 158406836 158410908 Ahy15g3561 15 158372350 158375747 PCT
Ahy19g3576 19 158406836 158410908 Ahy5g3151 5 113320859 113324303 PCT