Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3566 ATGGAGTCCCTTTGGAAACTCGTGTATCTGCTGGAGCCCGCACCTGTCACCCTCATAACTACAGCTGTAGCTGTGACATTTGCATCTGCTTTTCGAGCTCTAAATTACGGGAAAGAAATGGAGCGAAATCGCGACTTATCGGAAGCATCTATTACACTGGATAGGTCACAAGCATTGATGATACCAGTGATGAGCTCTTTCAGCTTGCTTTTGATGTTCTACTTGTTCTCGTCTGTGTCACAGCTTCTCACAGCGTTCACTGCAGTTGCTTCTGCATCATCCCTTTACTTCTGCTTGTCTCCTTATGTTGCCTATTTGAAGTCACAGTTTGGTTTAGCTGATCCTTTTGTGTCACGCTGTTGCTCAAAATCTTTTACACGAATCCAAGGGCTGCTATTGATATCATGCTCTGTCGTGGTGGCTGCTTGGCTTGTCTCTGGTCATTGGATACTGAATAATTTACTAGGCATATCGATATGCATTGCTTTTGTAAGCCATGTGCGCCTCCCAAACATCAAGATTTGTGCAATGCTCCTTCTTTGTCTATTTGTCTATGACATTTTCTGGGTTTTCTTCTCTGAAAGATTTTTTGGGGCAAATGTCATGGTATCAGTCGCGACACAGCAAGCATCAAATCCTGTGCACACGGTTGCTAATAGTTTGAGTCTTCCTGGGTTGCAACTGATAACAAAGAAATTGGAGTTGCCCGTAAAGATTGTATTTCCCAGAAATTTGTTGGGTGGTGTTGTTCCTGGAGAGAGTGCAACAGATTTTATGATGCTTGGTTTAGGAGACATGGCTATCCCTGGAATGCTCCTGGCTTTAGTTCTCTGCTTTGATTATCGAAAGAGCCGGGATACAGTAAATCTCTTTGAGTTACATTCTTCGAAAGGGCACAAATATATTTGGTATGCATTGCCTGGTTATGCAATTGGTCTGGTGACTGCTTTGGCAGCTGGTGTCTTGACCCACTCTCCTCAACCTGCACTTTTATATCTGGTGCCTTCTACCCTGGGACCCGTAATCGCCATCTCTTGGATTAAAAAGGAGCTACTTGAGTTGTGGGAAGGAAACATGCCAAATTTCAACGATAAGGATCGCGAAATAGAAGTTTAG 1116 0.4364 MESLWKLVYLLEPAPVTLITTAVAVTFASAFRALNYGKEMERNRDLSEASITLDRSQALMIPVMSSFSLLLMFYLFSSVSQLLTAFTAVASASSLYFCLSPYVAYLKSQFGLADPFVSRCCSKSFTRIQGLLLISCSVVVAAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLLCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIVFPRNLLGGVVPGESATDFMMLGLGDMAIPGMLLALVLCFDYRKSRDTVNLFELHSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIKKELLELWEGNMPNFNDKDREIEV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3566 371 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 4 359 - -
Ahy19g3566 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016021
Ahy19g3566 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 4 359 IPR007369 GO:0004190|GO:0016021
Ahy19g3566 371 Pfam Signal peptide peptidase 49 358 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3566 Ahy-Chr19 158327528 158330712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3566 K09598 - gmx:100794976 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3566 19 158327528 158330712 Ahy19g3566 19 158327528 158330712 ECH
Ahy19g3566 19 158327528 158330712 Ahy9g2061 9 109154544 109157773 hybridization