Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3556 ATGGCTCAGAAGATAGAGTTGAAGGTCCTTACTATGACTGATGAAAAAACCAAGAAAAAGGCAATTGAAGCAGTTGCAGATATCTTCGGGATTGATTCGATTGCTGTAGATATAAATGAACAGAAGATAACAGTGATTGGTGAAATGGATGCAGTGGCAGTAGTGAAGAAACTGAAGAAGATAGGGAAGGTTGACATATTATCGGTTGGACCTGCTAAGGAAGAAAAGAAAGAAGAAACAAAACAAGAAGAGAAGAAGGAAGAGAAGAAAGAAGAGGCAAACAAGGAGAATAAATAA 297 0.3737 MAQKIELKVLTMTDEKTKKKAIEAVADIFGIDSIAVDINEQKITVIGEMDAVAVVKKLKKIGKVDILSVGPAKEEKKEETKQEEKKEEKKEEANKENK* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3556 98 Pfam Heavy-metal-associated domain 8 63 IPR006121 GO:0046872
Ahy19g3556 98 SUPERFAMILY HMA, heavy metal-associated domain 2 63 IPR036163 GO:0046872
Ahy19g3556 98 Coils Coil 72 98 - -
Ahy19g3556 98 Gene3D - 1 75 - -
Ahy19g3556 98 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 97 - -
Ahy19g3556 98 PANTHER PROTEIN PXR1-LIKE ISOFORM X1 2 97 - -
Ahy19g3556 98 MobiDBLite consensus disorder prediction 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3556 Ahy-Chr19 158224356 158225360 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3556 - - sind:105160478 122.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3556 19 158224356 158225360 Ahy19g3556 19 158224356 158225360 ECH
Ahy19g3556 19 158224356 158225360 Ahy9g2070 9 109421801 109422791 hybridization