Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3553 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAACTCGAATTTCAGGCAACTCAGGTGCCAAAGATGAAGAAGTCTGCACTGATGGTATCTTTGGTTCCAGATGATGTTGGGAAACCAACTGTGAAACTGGAGAAAACTGAAGTTCAAGATGGGGCCTGCATATGGGAGAATCCAGTTTTTGAATCAGTTAAACTTGTTAGGGATGCTAAATCAGGAAAAATCCATGAGAAAATCTACCATTTCATTGTTTCCACTGGATCTTCAAAATCTGGCTTTCTTGGGGAAGCCTCAATTGATTTTGCTGATTTTGTAGCAGAAGCTGAGCCAATGACTGTCTCTCTACCCTTAAAATTCGCCAATTCCGGTGTAGTGTTACATGTGACAATTCAGAATGTGGAAGGATATACTGCTGAAAGAATTGGAGAAGATAATGGAGCTGAAGAACTTTATAATGACACAACCTTGAGACACCAACTGAGCTTTGGCAGTACAGAAGAAAGTTATAATGTTGAAGAAAATGGGAACATGGCCAAGACCAGATCTGGATATTCTGAACAAAATGCATCTAACGGCATTAGTCCTGGGGTAGCTTCATGGGAGGATCCTTATAGTTTCAGAAATACATCACTGCCATCATCAAAAGGAACTGGTGAGGCCACCGAGAACCAAGTGCACAAGAGGTCTAACACAAACTGGTCTCTTGGTTCAGGATCAGATGGAAGTTTAAACAGCCTTGAAGATAGTCTTCCAAGATTCCAAGGACATTCGGATAACACCATTGAAAAGCTCAAAAGTGAAATCACTTCTCTAAAGCGGCAAGCTGAAGTATCAGACTTAGAGTTACAATCGCTTCGAAAGCAGATAGAAAAAGAAAGCACTCGGGGACAAAATCTGTCGAGACAAATTATCAGTCTCAGAGAGGAGAGAGATGTGTTCAAACTTAAGTATGAGAAGCTCCAGTCCCAGCAGAGTTACAATGATGAGAGCAAAGCTTCAAGAGCCTTGAAGTCTGAGATTGAAGATACTAGGATTCAGTTAGAGGCAGTTAAGGAAGAGCTTGTTTATGAGAAAGAAACGAGTGCCAATCTTCAGTTGCAACTGCACAAGACACAGAGCTCAAACTCGGAACTACTTTTGGCTGTGACAGACCTTGAAGCAATGCTGGAACAAAAGAATAAGGAAATGTCAGATCTTTCTACCAATGTGAAATCCCAAAACAGTACTAGTCAGCGTGGTCATGCTAGAGAATTAGATTTCTTGAGGCAGAAAATTGAAGATCAGAATGGCGAAATAAACATGTACTGCAAGCAAAATGAAGAGCTAAACGAGCATATAAAAGAGCTCACTTTGGAGTATGACCTTCTTAAGAAGGAAAATGTTGATATCACTTTGAGATTGAAGCAAGATGAAGTTCAGCACCTTAAGTTACAAAATGAACATTCAGCTTCTTTGGCTACAATACAACTCCTCGAATCACAAGTAGAAAGACTAGAAGAAAGGATAAAGATGCTGGAAGATGAACATTCAACATCATTGGTCTACATCAAGGAACTTGAAAATGAAGTTAAGTCTTTGGAGAAAGAACTGAAAATGCAGGAAGAGAAATTTGAAGACGATATGCGTGCTATCCAACGTGCGAAAGCTGAGCAGGAAGAACGAGCCAGCCAAGCCGAAGAGGCCTTGAAAAAGACAAGACACAATAATGCTGTTGCTTCAGAGCGGTTTCAGGAGGAATATAGATTGCTTTCTGTTGAAATGGCGGCCAAAGTTGAGGAGAATGAAAAGATGAATGACAAAGCAGCTGCTGAAGCTGATGAATTGCGGCAGAAGAACAGACTTATAGAAGAAATGCTCCAGAAATGCAACCAAGAGCTCAGGCTAATTTCAGATCAGCACGAATTGAAACAGCAAGAGCTATTGAAGCAGATAGATTCAAAAGGAAAAGCAATGGAACACATGTCACATGAATTAGAAGTTAAATCCAAACAACTTGAAGAAGCAAAAAGGCAAAGGGATGAAAAGGAGGCTGCATTTTCAAAGCAAATTCAGTTGCTTAGATCTCAGATTAAAACATTGTTGGCAGAGGAGTGCACATTGTCTAAATCCAAGCTAAAAAAGAACACAGCTGAGATGGTAAGGATAGATGCACAAACAACAAATGATGAGGAGATGGTGCTCAGCACCCTACTGTCAGAAGTGGAAATCTTTAAGGTGCAGCACAATGAAACAAAACAAAGTTTGCACAAAGAACAAGTGGAGAAAGAATGTATGAAGAAACAGATATCTCAATTAGAAGGAGAGTTGAAGAAGAAGGAAGCGGAGTTAAGTGCTATGGAGAAGAAGATCAGGAATAACAAAGGACGAGATTATGCCGCACCTCTTTCTTCTGCTAAGGCCCAGATTAAGAAATCAAAACCAGAAATTGAGAAGGGAACGGATGCGGGAAGCAAATCAGCTAAGAACCAAGATAGCGAGGTCCGAATGCATGAACTGTTGAATGAAGTATCAGCCCTTAAGGAAAAGAACAAGAACATGGAAAGCGAGCTGAAAGAAATGGAAGATAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTTGAGGGAGAAAGACAGCAGCTCGTTATGGCGGTACGCAATCTCAAGAATGGTAAGAAGAACTAG 2676 0.4047 MFKSWSKKNKIKAVFKLEFQATQVPKMKKSALMVSLVPDDVGKPTVKLEKTEVQDGACIWENPVFESVKLVRDAKSGKIHEKIYHFIVSTGSSKSGFLGEASIDFADFVAEAEPMTVSLPLKFANSGVVLHVTIQNVEGYTAERIGEDNGAEELYNDTTLRHQLSFGSTEESYNVEENGNMAKTRSGYSEQNASNGISPGVASWEDPYSFRNTSLPSSKGTGEATENQVHKRSNTNWSLGSGSDGSLNSLEDSLPRFQGHSDNTIEKLKSEITSLKRQAEVSDLELQSLRKQIEKESTRGQNLSRQIISLREERDVFKLKYEKLQSQQSYNDESKASRALKSEIEDTRIQLEAVKEELVYEKETSANLQLQLHKTQSSNSELLLAVTDLEAMLEQKNKEMSDLSTNVKSQNSTSQRGHARELDFLRQKIEDQNGEINMYCKQNEELNEHIKELTLEYDLLKKENVDITLRLKQDEVQHLKLQNEHSASLATIQLLESQVERLEERIKMLEDEHSTSLVYIKELENEVKSLEKELKMQEEKFEDDMRAIQRAKAEQEERASQAEEALKKTRHNNAVASERFQEEYRLLSVEMAAKVEENEKMNDKAAAEADELRQKNRLIEEMLQKCNQELRLISDQHELKQQELLKQIDSKGKAMEHMSHELEVKSKQLEEAKRQRDEKEAAFSKQIQLLRSQIKTLLAEECTLSKSKLKKNTAEMVRIDAQTTNDEEMVLSTLLSEVEIFKVQHNETKQSLHKEQVEKECMKKQISQLEGELKKKEAELSAMEKKIRNNKGRDYAAPLSSAKAQIKKSKPEIEKGTDAGSKSAKNQDSEVRMHELLNEVSALKEKNKNMESELKEMEDRYSEISLKFAEVEGERQQLVMAVRNLKNGKKN* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3553 891 Coils Coil 655 689 - -
Ahy19g3553 891 MobiDBLite consensus disorder prediction 797 831 - -
Ahy19g3553 891 Gene3D - 413 584 - -
Ahy19g3553 891 Coils Coil 826 874 - -
Ahy19g3553 891 PANTHER BNAC08G20130D PROTEIN 1 891 - -
Ahy19g3553 891 Coils Coil 520 579 - -
Ahy19g3553 891 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 891 - -
Ahy19g3553 891 MobiDBLite consensus disorder prediction 185 262 - -
Ahy19g3553 891 MobiDBLite consensus disorder prediction 807 831 - -
Ahy19g3553 891 Coils Coil 485 512 - -
Ahy19g3553 891 MobiDBLite consensus disorder prediction 207 260 - -
Ahy19g3553 891 Coils Coil 337 357 - -
Ahy19g3553 891 Coils Coil 422 470 - -
Ahy19g3553 891 Coils Coil 379 413 - -
Ahy19g3553 891 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Ahy19g3553 891 Coils Coil 595 643 - -
Ahy19g3553 891 Coils Coil 752 793 - -
Ahy19g3553 891 Coils Coil 265 327 - -
Ahy19g3553 891 MobiDBLite consensus disorder prediction 185 199 - -
Ahy19g3553 891 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3553 Ahy-Chr19 158211835 158216517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3553 - - gmx:100806603 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3516 15 157902835 157907581 Ahy19g3553 19 158211835 158216517 ECH
Ahy19g3553 19 158211835 158216517 Ahy19g3553 19 158211835 158216517 ECH
Ahy19g3553 19 158211835 158216517 Ahy9g2073 9 109431502 109436364 hybridization
Ahy15g3516 15 157902835 157907581 Ahy19g3553 19 158211835 158216517 PCT
Ahy5g3105 5 112731930 112736839 Ahy19g3553 19 158211835 158216517 PCT