Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3544 ATGGAAGATGGTGATTATAGCATAAGGAGATGGGAGGATCTGGACATAGATATTTTGGTGAAAATTTTTCAGCTGCTCGACATCTTTGAGTTAACGGCTGGCATAGCTCATGTTTGTAGTGCGTGGCGTATGGCTTGCTGCGATCCACTTCTTTGGAAGACACTTGATTTGTCAATGTTAAAATCTAATTTCATCAAGATTCCATTGGAGCCATTTGTTTATGTTGATGGACGGTCTGACAGGAAATTAACCCGTTTATTGAAGATTTCCTTGAGTCTTAGCAGGCAGAGTATAATGACTTTGATATTTCACTTCAACTTGTATGTGAGTGATGAACAGTTGACATACACTGCTGAAAGGTGCCCAAAACTCCGACGGCTTGTTCTGCCAGCATGGAACAGAATTAAGAAAACAGGAATGTGCAAGGCTATTCGCGGCTGGAAAGATCTCGAGTCTTTGACAATGCCTAGCATAGCGAATCCCCCATATCTTCTGGAAGAAATCTCAAATCACTGCAAGAACTTCAGTGAACTAAAGATCATGGGGCCATGCGACATTTACTTCGCTTCATCTCTTGCTAAGTTTCTTCCGAAATTGAAAGTCTTGAGCCTTCGATGTTCAATGCTGTATAAGGATGTTCTTATTGTGATCCTAGATGGCTTGCAACATTTAGAAGTGCTCAACATATCACATTGCATCTTGATGGAAGCCGTTCCACCTCCTCAGCATAAAAGAGTTGTCAAAGAAATTGATCAGAGTATCCGACGGAAGGCTTCTCGGCTGCGCGAATTCATCACGTGCATGGACGACAACTGCATCATGTGCAATCGCACAAGAACTGATGAAGGGCTGGTTAGGTGGTACAAGTACGAGGAGGGGCTGTGGAAAGCAGATGAGGTCAGGTCCCTTGCACTCTAA 918 0.4325 MEDGDYSIRRWEDLDIDILVKIFQLLDIFELTAGIAHVCSAWRMACCDPLLWKTLDLSMLKSNFIKIPLEPFVYVDGRSDRKLTRLLKISLSLSRQSIMTLIFHFNLYVSDEQLTYTAERCPKLRRLVLPAWNRIKKTGMCKAIRGWKDLESLTMPSIANPPYLLEEISNHCKNFSELKIMGPCDIYFASSLAKFLPKLKVLSLRCSMLYKDVLIVILDGLQHLEVLNISHCILMEAVPPPQHKRVVKEIDQSIRRKASRLREFITCMDDNCIMCNRTRTDEGLVRWYKYEEGLWKADEVRSLAL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3544 305 SUPERFAMILY RNI-like 40 235 - -
Ahy19g3544 305 Pfam F-box-like 17 57 IPR001810 GO:0005515
Ahy19g3544 305 SUPERFAMILY F-box domain 11 52 IPR036047 GO:0005515
Ahy19g3544 305 PANTHER BNAANNG30020D PROTEIN 8 303 - -
Ahy19g3544 305 Gene3D - 6 56 - -
Ahy19g3544 305 Gene3D Ribonuclease Inhibitor 75 239 IPR032675 -
Ahy19g3544 305 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 8 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3544 Ahy-Chr19 158172225 158175178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3544 - - gmx:100789355 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3544 19 158172225 158175178 Ahy19g3544 19 158172225 158175178 ECH
Ahy19g3544 19 158172225 158175178 Ahy9g2081 9 109510214 109513319 hybridization