Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3543 ATGGAAGTGCAGCAAATATGGGAGACGGTGAAGGAGGCCATCGTGGCCTACACAGGCCTAGCTCCGGCCACTTTCTTCACGCTGGTGGCGCTCCTCTTTGCCGTTTACTACGTGGTTTCGGTGATGTTCGGGTCGCCAGCATACGAGGACTATCGGCGCCACGGGGAGAGGGATATGGAAGAGGAGCAGATGCCACCTCTGAAGCCGCCAGTCCAGATTGGTGAGGTAACTGAGGAGGAGCTCAAGGCCTACGATGGCACCGATCCCGAGAAGCCCCTTCTCATGGCCATCAAAGGTCAGATCTATGATGTCTCCCAAAGCAGGATGTTTTACGGACCCGGTGGACCCTATGCTCTTTTTGCAGGCAAGGATGCCAGCAGAGCTCTCGCTAAGATGTCTTTTGAAGACAAAGACCTCACTGGGGATATTTCTGGGCTTGGCCCTTTCGAGATTGAAGCCTTACAAGACTGGGAATACAAGTTTATGACCAAGTATGTTAAGGTCGGTACCATCAAACAAACTGCACGGGATTTGGATGTTGATTCTAAGCCTACTGAAGCTGCCCACTCTGAAACTCCCTCTCATGTTGATGCTCATAAAGATGAGTAA 609 0.5172 MEVQQIWETVKEAIVAYTGLAPATFFTLVALLFAVYYVVSVMFGSPAYEDYRRHGERDMEEEQMPPLKPPVQIGEVTEEELKAYDGTDPEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDKDLTGDISGLGPFEIEALQDWEYKFMTKYVKVGTIKQTARDLDVDSKPTEAAHSETPSHVDAHKDE* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3543 202 Gene3D - 74 172 IPR036400 -
Ahy19g3543 202 Pfam Cytochrome b5-like Heme/Steroid binding domain 77 171 IPR001199 -
Ahy19g3543 202 SMART Cyt_b5_2 76 172 IPR001199 -
Ahy19g3543 202 MobiDBLite consensus disorder prediction 176 202 - -
Ahy19g3543 202 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 4 191 - -
Ahy19g3543 202 PANTHER CYTOCHROME B5-LIKE HEME/STEROID-BINDING DOMAIN PROTEIN 4 191 - -
Ahy19g3543 202 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 69 172 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3543 Ahy-Chr19 158168387 158169440 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3543 K17278 - gmx:100788825 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3543 19 158168387 158169440 Ahy9g2082 9 109518765 109519846 hybridization
Ahy15g3510 15 157854171 157856488 Ahy19g3543 19 158168387 158169440 PCT
Ahy5g3099 5 112688239 112690433 Ahy19g3543 19 158168387 158169440 PCT
Ahy19g3543 19 158168387 158169440 Ahy15g3510 15 157854171 157856488 PCT
Ahy19g3543 19 158168387 158169440 Ahy5g3099 5 112688239 112690433 PCT