Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy19g3541 | ATGAAATCACGTGTAAGATGGGATGAGGCTAACATTGTAGAAATTGAATCAACCAAACCCGTGAGGCAGAAAATTACTGAGCCGAAGACTCCGTATCACCCTATGATTGATGATGAAGATTCTCCATCTCCCATAAGAGGAAGCTTTGAGGAATGTGTTGATGGTGAACATTGTGAAACAAATGCCGTATCAGCCTTTGATGATGCGGCTTCTGGTAGCAGAAAAGGCACAAAGGAGTCTGATGGCTGGACGTCGTCAGAGGATGAGGCAGAAGCAATGGAACAAGATGATGATGATAAGAATTTGAGTTTTAAAGAGCAGAGAAAGGCCCACTATGATGAATTCCTGAAAGTTAAAGAGCTGAGGCAGAAGGCTTCTCTTGTAGAGGACGAAAGTGACGAGGATAACAATGCCGAGCTAACCAAGGGGAAGGGGAGCAGTGACAAATCTGCAGTGAGTGCTAGCTGA | 468 | 0.4466 | MKSRVRWDEANIVEIESTKPVRQKITEPKTPYHPMIDDEDSPSPIRGSFEECVDGEHCETNAVSAFDDAASGSRKGTKESDGWTSSEDEAEAMEQDDDDKNLSFKEQRKAHYDEFLKVKELRQKASLVEDESDEDNNAELTKGKGSSDKSAVSAS* | 156 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy19g3541 | 155 | MobiDBLite | consensus disorder prediction | 125 | 155 | - | - | |
| Ahy19g3541 | 155 | Coils | Coil | 118 | 138 | - | - | |
| Ahy19g3541 | 155 | Gene3D | - | 39 | 135 | - | - | |
| Ahy19g3541 | 155 | Pfam | Protein phosphatase inhibitor 2 (IPP-2) | 5 | 133 | IPR007062 | GO:0004864|GO:0009966|GO:0043666 | |
| Ahy19g3541 | 155 | MobiDBLite | consensus disorder prediction | 31 | 47 | - | - | |
| Ahy19g3541 | 155 | MobiDBLite | consensus disorder prediction | 63 | 105 | - | - | |
| Ahy19g3541 | 155 | MobiDBLite | consensus disorder prediction | 125 | 142 | - | - | |
| Ahy19g3541 | 155 | PANTHER | PROTEIN PHOSPHATASE INHIBITOR | 1 | 151 | IPR007062 | GO:0004864|GO:0009966|GO:0043666 | |
| Ahy19g3541 | 155 | PANTHER | PHOSPHOPROTEIN PHOSPHATASE INHIBITOR | 1 | 151 | - | - | |
| Ahy19g3541 | 155 | MobiDBLite | consensus disorder prediction | 19 | 47 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy19g3541 | Ahy-Chr19 | 158156747 | 158159944 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy19g3541 | K16833 | - | gmx:100306297 | 199.134 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy19g3541 | 19 | 158156747 | 158159944 | Ahy19g3541 | 19 | 158156747 | 158159944 | ECH | |
| Ahy19g3541 | 19 | 158156747 | 158159944 | Ahy9g2084 | 9 | 109527716 | 109531006 | hybridization | |
| Ahy15g3504 | 15 | 157795371 | 157798754 | Ahy19g3541 | 19 | 158156747 | 158159944 | PCT | |
| Ahy5g3093 | 5 | 112610919 | 112613905 | Ahy19g3541 | 19 | 158156747 | 158159944 | PCT | |
| Ahy19g3541 | 19 | 158156747 | 158159944 | Ahy15g3504 | 15 | 157795371 | 157798754 | PCT | |
| Ahy19g3541 | 19 | 158156747 | 158159944 | Ahy5g3093 | 5 | 112610919 | 112613905 | PCT |