Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3534 ATGAGTAGTATGGGAGGGAGAGATCTTGAGAGTGGTGGAACCAAGAACACTTCTAGAGCTCCACCACAAGCAGCAGCAGTTTCTTCTTCTTCTTCATATGCTTATGATACAGAGACTCATTGGACATCATGGCTTGTGCCCATGTTTGTGGTTGCAAATATTGCTGTTTTCATCGTTGCCATGTACATCAACGATTGCCCCAAGAACAACATAGGACTCCAGGGTAATTGTGTCGCCAGGTTCCTTGGCAGGTTCTCTTTTCAGCCTCTTAGGGAGAATCCACTGCTTGGCCCTTCTTCTTCAACGTTGAGAAAGATGGGAGGTCTTGAGTGGGATAATGTTGTGAATAAGCATCAGGCATGGAGACTTGTCACTTGCATTTGGTTACATGCTGGAATTATTCATTTGCTAGCAAACATGTTGAGTCTGGTCTTCATTGGTATTCGCCTTGAGCAGCAATTTGGATTTGTGAGAATAGGAATCATATATCTAGTGTCTGGATTTGGGGGGAGTGTGCTGTCTACTCTGTTCATTAGAAACAACATTTCTGTTGGTGCATCTGGTGCTCTCTTTGGACTACTTGGAGCAATGCTTTCGGAACTTTTCACAAACTGGACCATCTATTCAAATAAAGCAATGGCTTTGATCACACTTTTGGTTATCATTGTCATCAACCTTGCCCTTGGCATTTTGCCCCACGTTGATAATTTCGCTCACATCGGAGGATTCCTTACCGGATTCCTTCTCGGTTTCATTTTGCTGCCCCGTCCTCAGTTTGGTTGGTTAGAGCAGCGTCATCTTCCGGCGGGTGTTCGCCTCAAGTCCAAGTACAAGGCTTACCAGTATGTTCTATGGATACTCTCCCTCCTTCTCTTGATTGCTGGGTTATCAATTGCATTGGTGATGCTATTTCGGGGTGAAAATGGATATGATCACTGCCATTGGTGCCACTACCTTACATGCGTTCCAACTTCTAAATGGAAATGCAATGACACTTAA 999 0.4434 MSSMGGRDLESGGTKNTSRAPPQAAAVSSSSSYAYDTETHWTSWLVPMFVVANIAVFIVAMYINDCPKNNIGLQGNCVARFLGRFSFQPLRENPLLGPSSSTLRKMGGLEWDNVVNKHQAWRLVTCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSVLSTLFIRNNISVGASGALFGLLGAMLSELFTNWTIYSNKAMALITLLVIIVINLALGILPHVDNFAHIGGFLTGFLLGFILLPRPQFGWLEQRHLPAGVRLKSKYKAYQYVLWILSLLLLIAGLSIALVMLFRGENGYDHCHWCHYLTCVPTSKWKCNDT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3534 332 MobiDBLite consensus disorder prediction 1 24 - -
Ahy19g3534 332 SUPERFAMILY Rhomboid-like 41 258 IPR035952 -
Ahy19g3534 332 Pfam Rhomboid family 115 257 IPR022764 GO:0004252|GO:0016021
Ahy19g3534 332 PANTHER RHOMBOID-RELATED 7 331 IPR002610 GO:0004252|GO:0006508|GO:0016021
Ahy19g3534 332 PANTHER RHOMBOID-LIKE PROTEIN 3 7 331 - -
Ahy19g3534 332 Gene3D - 39 256 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3534 Ahy-Chr19 158096364 158098523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3534 - - gmx:100813345 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3497 15 157707669 157710412 Ahy19g3534 19 158096364 158098523 ECH
Ahy19g3534 19 158096364 158098523 Ahy19g3534 19 158096364 158098523 ECH
Ahy19g3534 19 158096364 158098523 Ahy9g2091 9 109593381 109595477 hybridization