Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3533 ATGGAAAGCTACAAAGCAATGATAATACTTTTGGCAGTGATGTTAATGTCATATGTCCCATTTGCACCTGCAGTCATAGATTGCCCAATAGTGAACCAGCTATTCTCAGCATGCTCCATATTCATCACATATGGCTCGCCAGACCCCATGCCAGGAACACCATGTTGTGATGCAATGTCTGGATTGAACATCATTGCTAATGCTAACTCTGGTGACAATAGGCAATCTGTTTGTAGGTGCTTAATGGGCCTCGTTGAAACCTATAACCCAAATGCCACTGCTATTGGTACCTTACCGGGCCTCTGTGGTGTCTCTTTGGGCTTCACCATTGATCCTAACACAAACTGCGGTTTCTAA 357 0.4426 MESYKAMIILLAVMLMSYVPFAPAVIDCPIVNQLFSACSIFITYGSPDPMPGTPCCDAMSGLNIIANANSGDNRQSVCRCLMGLVETYNPNATAIGTLPGLCGVSLGFTIDPNTNCGF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3533 118 CDD nsLTP1 26 116 - -
Ahy19g3533 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 117 IPR036312 -
Ahy19g3533 118 PRINTS Plant phospholipid transfer protein signature 73 88 IPR000528 GO:0006869|GO:0008289
Ahy19g3533 118 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Ahy19g3533 118 PRINTS Plant phospholipid transfer protein signature 107 118 IPR000528 GO:0006869|GO:0008289
Ahy19g3533 118 PRINTS Plant phospholipid transfer protein signature 89 106 IPR000528 GO:0006869|GO:0008289
Ahy19g3533 118 PANTHER - 1 116 IPR000528 GO:0006869|GO:0008289
Ahy19g3533 118 Gene3D - 26 118 IPR036312 -
Ahy19g3533 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 14-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3533 Ahy-Chr19 158095343 158095699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3533 7 116 Acyl Lipid Metabolism Gene Families AT5G01870 29.825 1.95e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3533 - - gmx:102665845 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3533 19 158095343 158095699 Ahy19g3533 19 158095343 158095699 ECH
Ahy19g3533 19 158095343 158095699 Ahy9g2092 9 109596094 109596904 hybridization