Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3530 ATGGTATCCTTAAGCTCTCATTTCCATTCCACCAACTACTACTTGAATAGGAATAATAATTCTCATCACAATCACAATTTCAGAATCAAGCACTATGTTTCATGCTCTGCCCAGCCTACACAAACCAACATTAAGGTAGTGATAAATGGAGCAGCCAAGGAGATAGGAAGAGCAGCAGTGGAAGCTGTGACTAAAGCTAGGGGAATGGAACTTGCTGGTGCTGTAGATACTTGTCATGTTGGGGAAGATATTGGACAGGTATGTGGCATGGAAGAGCCCCTCGAAATACCCATAATAAATAATCTCACTATGGTTTTGGGTTCTATATCTCAGTCCAAGGGAGCAGGAGTTGTAGTTGATTTTACTGAGCCTTCCTCCGTATATGACAATGTAAAACAGGTAACAGCATTTGGCATGAGAAGCGTAGTGCACGTTCCGCGAATGGAATTAGATACGGTTGCAGCATTATCTGCATTCTGTGACAAGGCCACCATGGGTGTGTTGGTTGCACCAACCCTTTCCATAGGATCAATATTGCTACAACAAGCTGCAATCTCAGCTTCTTTCCATTACAGAAACGTTGAGATTGTGGAATCCAAGGCTAATGCAAATGATCTTCCATCAGTAGATGCAAACCAAATAGCAAAGAATCTGTCAAACCTGGGTCAGATCTATAACAGAGAAGATGCTTCAACGGATGTGTTGGCAAGGGGTCAAGTCCTTGGAGATGGAATTCGTGTGCATAGCTTGGTACTTCCAGGACTTCCCTCAAGTACAACAGTTCACTTCTCTGCTCCAGGAGAGATATATTCTATCAAGCATGATATTACAAATGTGCAATGCCTCATGCCAGGCTTGCTGTTAGCCATTAGAAAAGTTGTGCGCCTCAAGAATTTGGTGTATGGCTTGGAGAAGTTTTTGTAA 924 0.4275 MVSLSSHFHSTNYYLNRNNNSHHNHNFRIKHYVSCSAQPTQTNIKVVINGAAKEIGRAAVEAVTKARGMELAGAVDTCHVGEDIGQVCGMEEPLEIPIINNLTMVLGSISQSKGAGVVVDFTEPSSVYDNVKQVTAFGMRSVVHVPRMELDTVAALSAFCDKATMGVLVAPTLSIGSILLQQAAISASFHYRNVEIVESKANANDLPSVDANQIAKNLSNLGQIYNREDASTDVLARGQVLGDGIRVHSLVLPGLPSSTTVHFSAPGEIYSIKHDITNVQCLMPGLLLAIRKVVRLKNLVYGLEKFL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3530 307 PANTHER DIHYDRODIPICOLINATE REDUCTASE-LIKE PROTEIN CRR1, CHLOROPLASTIC 26 307 - -
Ahy19g3530 307 PIRSF DHPR 42 307 IPR023940 GO:0008839|GO:0009089
Ahy19g3530 307 Pfam Dihydrodipicolinate reductase, N-terminus 44 171 IPR000846 GO:0008839|GO:0009089
Ahy19g3530 307 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 174 278 - -
Ahy19g3530 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 198 IPR036291 -
Ahy19g3530 307 Gene3D - 43 201 - -
Ahy19g3530 307 TIGRFAM dapB: 4-hydroxy-tetrahydrodipicolinate reductase 44 307 IPR023940 GO:0008839|GO:0009089
Ahy19g3530 307 Pfam Dihydrodipicolinate reductase, C-terminus 179 307 IPR022663 GO:0008839|GO:0009089
Ahy19g3530 307 PANTHER DIHYDRODIPICOLINATE REDUCTASE 26 307 IPR023940 GO:0008839|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3530 Ahy-Chr19 158075686 158077532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3530 K16908 - gmx:100782083 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3530 19 158075686 158077532 Ahy19g3530 19 158075686 158077532 ECH
Ahy19g3530 19 158075686 158077532 Ahy9g2095 9 109612018 109613820 hybridization