Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3528 ATGTGTCAGCAAAGTGAGTACCTTGGTGGCTCAGACAGCAACATGCTGAGGGAAACATTGTTGATCCAAAATGAAACACAAGAAGAAGAAGAAGAAAAGTGTCTAACAAGACATGAGAGTGAAGATGCCATGAGAGAAGTAATCTCCATATCCAAAATAGCATTCCCAATGATTCTCACCGGTCTATTGCTCTACTGCCGCTCCATGATCTCCATGCTCTTCCTCGGCCGCCTGGGCGAACTCGCCTTAGCCGGCGGCTCCCTCGCACTAGGCTTCGCCAACATAACCGGCTACTCTGTCCTCTCCGGCCTGGCCGTGGGCATGGAACCCATTTGCGGACAGGCCTTTGGCGCCAAAAAGTTCACCCTGCTGGGCCTATGCTTACAAAGAACCATTCTCTTGCTTCTCTTCACCTCCATCCCCATAACACTGCTCTGGCTCCACGTGAAGCAAATCCTTCTCTTGTGTAACCAGGATGAGGACATAGCAACGCAAGCGCAGTCATTTCTTGTGTATTCCATCCCTGACCTCATTGCACAGTCTTTTCTACACCCTTTGAGAATTTACCTTAGAACCCAATCCATTACTCTGCCTCTTACCCTCTGCGCCGCCTTCTCTATTCTCCTCCACATACCAATCAACTATCTCCTTGTTTCTCACCTCAATCTTGGAATCAAAGGCGTGGCCTTAAGTGGGGTGTGGACAAATTTCAACCTTGTTGCTTCCTTGATCCTCTACATAGTTTTCTCTGGCACGCACAACAAAACATGGGGGGGTTTCACTTTCGAGTGTTTCACACAGTGGAGAAACCTCTTGAACCTTGCAATTCCAAGCTGCATTTCCGTGTGCCTGGAATGGTGGTGGTATGAGATCATGATCCTTCTCTGCGGTTTGCTGGTGAATCCAAGAGCAACAGTGGCTTCAATGGGAATCCTGATTCAAACGACTTCCCTTCTCTACATTTTCCCATCATCATTGAGCTTCAGTGTGTCAACAAGAGTGGGTAACAAGCTCGGTGAACAACAACCCTCAAAAGCAAAGCTTTCTGCAATTGTGGGCCTCATTTGCAGCATAATGTTGGGACTCACAGCTTTGGTGTTTTCTGTGATGGTTAGGAATATATGGGCCACCATGTTCACAGAGGACCAAGAGATTATAGCATTAACGTCAATGGTGTTACCCATCATAGGCCTTTGTGAACTCGGAAACTGTCCTCAAACAACGGGTTGTGGTGTTCTTAGAGGAACAGCAAGGCCTAAAGTGGGTGCACACATTAACTTGGGTTGCTTCTACCTTGTTGGAATGCCTGTGGCAATTTGGTTAGCTTTCTTTGCATCTTTTGATTTCCAAGGCTTGTGGCTTGGCTTGCTCGCTGCTCAAGCTTCTTGTGCTCTTACAATGTTGCTCGTTTTGTATGCAACTGACTGGGAATTTCAGGCCCAAAGAGCTGAGAAGCTCACAGCAACTGATGCTGTTCTTCTTCATGATGATCCAGAGAACAAACTACCAAACCAAGATTCTTTATTGTCTTAA 1533 0.469 MCQQSEYLGGSDSNMLRETLLIQNETQEEEEEKCLTRHESEDAMREVISISKIAFPMILTGLLLYCRSMISMLFLGRLGELALAGGSLALGFANITGYSVLSGLAVGMEPICGQAFGAKKFTLLGLCLQRTILLLLFTSIPITLLWLHVKQILLLCNQDEDIATQAQSFLVYSIPDLIAQSFLHPLRIYLRTQSITLPLTLCAAFSILLHIPINYLLVSHLNLGIKGVALSGVWTNFNLVASLILYIVFSGTHNKTWGGFTFECFTQWRNLLNLAIPSCISVCLEWWWYEIMILLCGLLVNPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGEQQPSKAKLSAIVGLICSIMLGLTALVFSVMVRNIWATMFTEDQEIIALTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKVGAHINLGCFYLVGMPVAIWLAFFASFDFQGLWLGLLAAQASCALTMLLVLYATDWEFQAQRAEKLTATDAVLLHDDPENKLPNQDSLLS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3528 510 PANTHER PROTEIN DETOXIFICATION 32 494 - -
Ahy19g3528 510 CDD MATE_eukaryotic 46 482 IPR045069 GO:0042910|GO:1990961
Ahy19g3528 510 Pfam MatE 56 216 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy19g3528 510 Pfam MatE 277 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy19g3528 510 PANTHER MULTIDRUG RESISTANCE PROTEIN 32 494 - -
Ahy19g3528 510 TIGRFAM matE: MATE efflux family protein 56 453 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3528 Ahy-Chr19 158047385 158049503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3528 K03327 - gmx:100788027 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3465 15 157338497 157340958 Ahy19g3528 19 158047385 158049503 ECH
Ahy19g3528 19 158047385 158049503 Ahy19g3528 19 158047385 158049503 ECH