Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3512 ATGGCGTTCTCTTCTTCTATGATTAACAGCTTCATCCTCTCTTCCTTTAAACCCCAACAATCCATCCTCTCTTTTCCCTCCAGCTCGTATGGTGATTCCTTCAAACCTCGAAAGCCTCTTCTTCCCTTCAGAATCCGCTCTGTTCCAACGTTAATAAGAGCCACTTCATCGTCATCCTCTTCTTCTCCCGCAACCATTGCCGAACCTGAAGGCATTAAGATTAATTCAATTCCAACCAAACCAATCGAAGGGCAAAAGACCGGTACCAGTGGACTTCGAAAAAAGGTGAAAGTGTTTATGCAAGAAAATTACCTCGCAAACTGGATACAGGCACTGTTTAATTCCTTGCCTCCAGAGGATTACAAGAATGGTGTATTGGTGTTGGGAGGTGATGGTCGATACTTCAACCGGGAAGCTGCGCAGATTATAATCAAAATTGCTGCCGGGAATGGTGTCGGAAAAATTTTGGTTGGACAGGAAGGTATATTGTCAACACCAGCTGTTTCTGCTGTGATAAGGAAGCAGAAGGCAAATGGTGGATTTATTATGAGTGCTAGCCATAATCCTGGAGGGCCGGAATATGATTGGGGTATTAAGTTTAATTACAGTAGTGGACAGCCTGCTCCGGAATCCATCACTGACAAGATTTATGGAAACACACTATCTATATCTGAGATAAAGATCGCTGACATTCCTGATGTTGACTTATCAAAAACTGGGGTTACAAAGTTTGGAAGCTTCAGTGTTGAAGTAATAGACCCTGTGTCTGACTATTTGGAGCTACTGGAGAGTGTATTTGATTTTCAGCTAATAAGGAGTCTTATATCAAGGCCAGATTTTAGGTTTACATTTGATGCAATGCATGCAGTTACTGGCGCTTATGCCAAACCTATTTTTGTTGATAAACTTGGTGCAAGTCCGGATTCAATCGCAAATGGAATCCCTTTGGAAGATTTTGGACATGGTCATCCTGATCCTAATCTAACATATGCAAAGGATCTTGTCAACATTTTGTATGCTGAAAATGGTCCTGATTTTGGAGCTGCTAGTGATGGTGATGGTGATAGAAATATGATTTTAGGAAGATGTTTCTTCGTAACTCCTTCAGATTCTGTAGCAGTTATTGCAGCCAATGCAAGAGAAGCAATTCCATACTTCAAGGATGGTGTTAAGGGTCTTGCTAGATCAATGCCAACAAGTGGTGCTCTAGATCGTGTTGCAGAGAAATTGAACCTTCCCTTTTTTGAGGTCCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGGAAGTTATCAGTTTGCGGGGAAGAGAGTTTTGGAACAGGCTCTGACCACATTCGTGAGAAGGATGGCATCTGGGCTGTTTTAGCTTGGCTTTCTATTATTGCGCACCGCAACAAAGACAAGAAGGCAGGGGAGAAACTGATCTCTGTGGCTGATGTTGTGAAGGAACACTGGGCAACTTATGGAAGAAATTTCTTTTCTAGATATGACTATGAGGAATGTGAATCTGAAGGTGCCAATAAAATGGTAGCATACCTACGAGAGACTGCATCAAAGAGCAAGACTGGTGATAAGTATGGAAGCTATGTCCTCCAATTTGCAGATGACTTCACATACACTGATCCTGTAGACGGAAGCGTGGTATCAAAACAAGGCGTTCGGTTTGTTTTTACTGATGGCTCGAGGATTATATATCGTTTATCAGGAACTGGTTCTGCAGGTGCAACTGTTAGAGTTTACATTGAACAGTTTGAACCTGATGCCTCCAAACATGACCTTGATGCTCAAGTTGCCTTAAAACCATTAATAGATTTAGCACTATCTCTGTCAAAGCTCAAAGACTTCACAGGGAGGGAGAAGCCTACAGTGATCACATAA 1887 0.4213 MAFSSSMINSFILSSFKPQQSILSFPSSSYGDSFKPRKPLLPFRIRSVPTLIRATSSSSSSSPATIAEPEGIKINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGVLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGQEGILSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSKTGVTKFGSFSVEVIDPVSDYLELLESVFDFQLIRSLISRPDFRFTFDAMHAVTGAYAKPIFVDKLGASPDSIANGIPLEDFGHGHPDPNLTYAKDLVNILYAENGPDFGAASDGDGDRNMILGRCFFVTPSDSVAVIAANAREAIPYFKDGVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGKLSVCGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDKKAGEKLISVADVVKEHWATYGRNFFSRYDYEECESEGANKMVAYLRETASKSKTGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDASKHDLDAQVALKPLIDLALSLSKLKDFTGREKPTVIT* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3512 628 SUPERFAMILY Phosphoglucomutase, first 3 domains 256 365 IPR016055 GO:0005975|GO:0016868
Ahy19g3512 628 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 56 628 IPR045244 GO:0004614|GO:0005975
Ahy19g3512 628 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 85 224 IPR005844 GO:0005975|GO:0016868
Ahy19g3512 628 Gene3D - 262 364 - -
Ahy19g3512 628 PRINTS Phosphoglucomutase/phosphomannomutase family signature 179 193 IPR005841 GO:0005975|GO:0016868
Ahy19g3512 628 PRINTS Phosphoglucomutase/phosphomannomutase family signature 279 298 IPR005841 GO:0005975|GO:0016868
Ahy19g3512 628 PRINTS Phosphoglucomutase/phosphomannomutase family signature 315 328 IPR005841 GO:0005975|GO:0016868
Ahy19g3512 628 PRINTS Phosphoglucomutase/phosphomannomutase family signature 344 359 IPR005841 GO:0005975|GO:0016868
Ahy19g3512 628 Gene3D - 73 261 - -
Ahy19g3512 628 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 257 359 IPR005845 GO:0005975
Ahy19g3512 628 Gene3D - 474 628 - -
Ahy19g3512 628 CDD PGM1 77 628 - -
Ahy19g3512 628 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 551 603 IPR005843 GO:0016868|GO:0071704
Ahy19g3512 628 SUPERFAMILY Phosphoglucomutase, first 3 domains 74 286 IPR016055 GO:0005975|GO:0016868
Ahy19g3512 628 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 368 491 IPR005846 GO:0005975|GO:0016868
Ahy19g3512 628 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 180 189 IPR016066 GO:0000287
Ahy19g3512 628 SUPERFAMILY Phosphoglucomutase, C-terminal domain 493 628 IPR036900 GO:0016868|GO:0071704
Ahy19g3512 628 SUPERFAMILY Phosphoglucomutase, first 3 domains 352 498 IPR016055 GO:0005975|GO:0016868
Ahy19g3512 628 Gene3D - 365 463 - -
Ahy19g3512 628 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 56 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3512 Ahy-Chr19 157841090 157847135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3512 K01835 - gmx:100802730 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3512 19 157841090 157847135 Ahy19g3512 19 157841090 157847135 ECH
Ahy19g3512 19 157841090 157847135 Ahy9g2117 9 109924797 109926780 hybridization