Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3499 ATGGAATCCGTTTTAAGCTTCAACAAGATGATAATGAAGCCACTGGCACCGAAGGGGTTTGCTGAGAGCAACATAGCAGCAAGGAAGAAGAGTCGCATGGCGGTGGTTGTGAAAGCAGAGGGTGCGGGTGTTGGTGTTGGAATCAACCCTGATATCAGGAAGACTGAGGAGAAGGTTGTGGACTCTGTTGTTGTCTCTGAACTCTCTAAACCCCTCACTCCCTATTGCAGATGTTGGAGATCAGGAACTTTTCCTCTGTGCGACGGAAGCCATGTAAAGCATAACAAGGCCACTGGGGATAACGTTGGACCTCTGCTTCTGAAAAAGTAG 330 0.4848 MESVLSFNKMIMKPLAPKGFAESNIAARKKSRMAVVVKAEGAGVGVGINPDIRKTEEKVVDSVVVSELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3499 109 SMART znf_cdgsh 58 97 IPR018967 GO:0043231|GO:0051537
Ahy19g3499 109 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 16 109 IPR045131 GO:0010506|GO:0051537
Ahy19g3499 109 Gene3D - 64 109 IPR042216 -
Ahy19g3499 109 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 16 109 - -
Ahy19g3499 109 Pfam Iron-binding zinc finger CDGSH type 63 91 IPR018967 GO:0043231|GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3499 Ahy-Chr19 157695890 157697266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3499 K23882 - gmx:100783951 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3499 19 157695890 157697266 Ahy19g3499 19 157695890 157697266 ECH