Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3498 ATGGCGCAGACCGGCAAAGTTCGCTGCCAGAGGATTGGTTGTGACGCCATCTTCTCCGACGACGATAACCCTGACGGTTCCTGTCGATATCATGATTCTGGACCAATCTTTCATGATGGGATGAAAGAATGGAGCTGTTGCAAGAAAAGAAGTCATGATTTCAGCCTGTTTTTGGAAATTCCAGGATGTAAGACCGGAAAACATACATCCGAAAAGCAAGTGATTGCACCGGTTAAGAAGGCTACTGTGGCTGCTCCAACTGCAGCTCCTTCAACCAATGCATCGGCAAAGGACTCTTGTTCTAGGTGTCGGCAGGGATTCTTTTGCTCAGATCATGGTTCACAAGTCAAACCTGTAAATACTGTTGGAGACAACCCTGGAAGTGTTGCCGGACATGTCTGCGCTGAGACCAATTCAAGTGTTCAGGATCCAAAGGATCCTAAGAAGATAGTCGATATAAACGAGCCCCAAGCGTGTAAAAATAAAGGGTGCGGCCAAACTTTCAAGGAGAAGGATAATCATGAGACTGCTTGCAGCTACCATCCTGGCCCCGCGGTGTTTCACGACCGGATGAGAGGGTGGAAGTGCTGTGACATTCACGTGAAAGAATTTGATGAGTTTATGAGTATTCCTCCATGCACAAAGGGATGGCATAATGCTGACCCTGATCAATGA 675 0.4726 MAQTGKVRCQRIGCDAIFSDDDNPDGSCRYHDSGPIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTSEKQVIAPVKKATVAAPTAAPSTNASAKDSCSRCRQGFFCSDHGSQVKPVNTVGDNPGSVAGHVCAETNSSVQDPKDPKKIVDINEPQACKNKGCGQTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCTKGWHNADPDQ* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3498 224 ProSiteProfiles CHORD domain profile. 9 68 IPR007051 -
Ahy19g3498 224 Pfam CHORD 158 218 IPR007051 -
Ahy19g3498 224 Pfam CHORD 8 68 IPR007051 -
Ahy19g3498 224 ProSiteProfiles CHORD domain profile. 159 218 IPR007051 -
Ahy19g3498 224 Gene3D - 151 221 - -
Ahy19g3498 224 Gene3D - 1 72 - -
Ahy19g3498 224 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 222 IPR043316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3498 Ahy-Chr19 157690890 157694055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3498 K13458 - gmx:100194419 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3498 19 157690890 157694055 Ahy19g3498 19 157690890 157694055 ECH
Ahy19g3498 19 157690890 157694055 Ahy9g2137 9 110273929 110277142 hybridization