Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3366 ATGAATAACTTTCACATAGCACTCTTCTTCCTCATTGGGATTGTGTCCTCCATTTTGTTTCAGATTTCAGTTGCATCTGTTGTTTCAACAGGAAACTTCAATAAGGACTTCTATGTTTTATGGTCACCTACCCATGTAAACACATCTGCTGATGGACACACTAGAACTTTGAAGCTTGATCAACAATCCGGGGCTGGTTTTGCTTCAAATCAGATGTTTTTGTTTGGACAAATTGACATGCAAATCAAACTAGTACCAGGTGATTCTGCAGGCACAGTATTAGCCTACTATATGGCATCTGATCAACCAAATCGCGACGAGATTGACTTTGAGTTTCTAGGAAACATGTCTGAGCAGCCTTATATTCTTCAAACAAATATTTATGCAGATGGGTTTGGCAATAGAGAGGAGAGGATTTATCTATGGTTTGATCCTACAAAGGACTTCCATACTTACTCAGTGTTGTGGAATCTGCACCAGATTGTGTTCATGGTGGATAGCATTCCAATAAGAGTGTACAGAAACCATGGTGACAAGGGAGTTCCATTTCCAAGAAGGCAACCAATGAGTCTAGAAGCAACTCTTTGGAATGGTGATAGCTGGGCAACAAGAGGAGGTCAAGACAAGATAGATTGGACAAAGGGTCCCTTCATAGCTTCATTCAGGAACTACAACATTGATGCTTGTGTGTGGAAAGGGAACCCAAGGTTCTGCAGAGTAGCTAGCCATGTTAATTGGTGGAACCTAAACAACTTCAGCACACTCACATCCCCACAAAGAAGGTGGTTCAAATGGGTCAGGAAATACCATATGATTTATGATTATTGCCAAGATAATGAGAGGTTCCAAAACAATCTTCCACAGGAATGTTCCCTTCCCAAGTATTGA 888 0.4088 MNNFHIALFFLIGIVSSILFQISVASVVSTGNFNKDFYVLWSPTHVNTSADGHTRTLKLDQQSGAGFASNQMFLFGQIDMQIKLVPGDSAGTVLAYYMASDQPNRDEIDFEFLGNMSEQPYILQTNIYADGFGNREERIYLWFDPTKDFHTYSVLWNLHQIVFMVDSIPIRVYRNHGDKGVPFPRRQPMSLEATLWNGDSWATRGGQDKIDWTKGPFIASFRNYNIDACVWKGNPRFCRVASHVNWWNLNNFSTLTSPQRRWFKWVRKYHMIYDYCQDNERFQNNLPQECSLPKY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3366 295 CDD GH16_XET 29 290 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy19g3366 295 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 244 290 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Ahy19g3366 295 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 10-RELATED 8 293 - -
Ahy19g3366 295 ProSitePatterns Glycosyl hydrolases family 16 active sites. 107 117 IPR008263 GO:0004553|GO:0005975
Ahy19g3366 295 PIRSF EndGlu_transf 1 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy19g3366 295 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 221 IPR000757 GO:0004553|GO:0005975
Ahy19g3366 295 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 293 IPR013320 -
Ahy19g3366 295 Gene3D - 19 294 - -
Ahy19g3366 295 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 8 293 IPR044791 GO:0004553
Ahy19g3366 295 Pfam Glycosyl hydrolases family 16 34 214 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3366 Ahy-Chr19 156536987 156538330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3366 69 295 Glycoside Hydrolase AT2G14620 74.449 5.64e-134 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3366 K08235 - gmx:100783152 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3366 19 156536987 156538330 Ahy19g3366 19 156536987 156538330 ECH
Ahy19g3366 19 156536987 156538330 Ahy9g2270 9 111679968 111681265 hybridization