Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3353 ATGTCCAATAATCCGCAATATCCGGGTTTACAGCCTCTTCGGCCTCCTGGACCTCCCATTGCTGGTTCACTGGATCCTCAGCGCAGTTTTGTTCCAGCTCCCATGCCTGGTCAATATCGCCCTGTAGTTCCTACTCAGCAGCCTCAACAGTTCATGCCCATGCCATCTCAACATTACCCTCCTGTTGGTCCCAGTGGTCCCATGATGAATGTTGGAATGCCTCCTCAAAATCAACAGCCCCAATTTCCTCAACCCATTCAACAGTTACCTCCAAGACCTGGCCAACAATTGCAACTCCCACCACAGCCGCAGCCACTTCCATTGTCAGTTGCTCGGCCAAACATGCACATGACATCTGAATCAATGATGCCGCAGCCTGATTCTCAAGTGCCAAATGGCTATGCACCAAGCTTAGGTGGCCCGGGAATGCCCCTTCCAGCATCATATACGTTTGGACCATCTTCTTATGGTCAAGTGCAAACTAATTTTAGCTCTGCTAGCCAATTCCACCCTGCTTCTCAAATCCAAGCTCCCTCTAGTTCTTCTTCCCAGAGCATTACCTCTGATACAGTTGTTCTGAGCAATGACGAGAAACCTTCAACTACATCTGTCACGCCTTCAGCAACTGGCATCCAGCCTTCACTTGCGAATGGTGGATCCACAGATTGGATTGAGCATACTTCTTCTAATGGAGTAAGATATTACTACAATAAGAAGACTAAAGTATCTAGCTGGGAGAGGCCTTTCGAATTGATGACCCCAATTGAGAGGGTGGATGCAACAACAAACTGGAAGGAGTATACTAGTCCTAATGGAATAAAGTATTACCACAACAAGGTCACTAGGGAATCAAAGTGGATGATTCCTGAGGAACTGAAGTTGGCCCGTCAGCAAGTTGAAAAGGCAGTTGCCAATGGAACACATACTGATGCTCTACCGAATTCTCATACTCAACCGTCTGTAACTCCTCCTGTGATTGAAACAGCACCAACTGCAGCAGCTAATTCATCTTTGATTGGTCAAGGGGAACCATCAAGTCCTGTTTCAGTTGCTCCTGTTGTTAGTGCATCTACAAGTCATCCACAATCTGAGATGAGTTCTGGACCATCTGCCTCTCCTCATGTGGCTCCCATAACTGGAATGACAGTGGCTGAAGTAGAGTTACCAGTAAATACTGCTACAATATCTGATGCTGCAGCAGGAAGTGATAGAGCTTCTGTTACCAATCAGAATGATGGCAACAACTTTCTGGTGAAGGATACACTGGGCTCTGCAGATGAAGTTCCAGCAGAAGATAAAGAAGATGGTAAAAATGATTCGTTAGTAGAAAAAACAAATGATGTGGCTTCAGAAACAAAGGCAGATACGGTTTCAGAAACAAGGGCTGATTTGGCTTCAGAAACACAGGCAAATGTGGCTTTGGAAACAAAGGCAGATGCATCTTCAGAAACAAAAACACGTGAACCATTACCCTTAGTTTATGCAAATAAGATGGAGGCTAAAGAAGCATTCAAAGCACTGATAGAGTCTGTAAATGTTGGATCTGACTGGACATGGGATCGAACTATGCGATTAATAGTTAATGACAAAAGGTACGGTGCATTAAAATCGCTTGGAGAAAAGAAGCAAGCTTTCAATGAGTACTTAAGTCAGAGGAAAAAACAGGAAGCAGAAGAAAAGCGCATGAAGCATAAAAAAGCACGAGAGGATTTTAAAAAGATGTTAGAAGAGTCCACGGAGTTGAATCCATCCACTAGATGGAGCAAAGCCGTGACAATATTTGAAAATGATGAACGTTTCAAGGCTGTTGAGCGTGACAGAGATCGCAGGGATATGTTTGATAGTTTCTTGGAGGAACTTATAAACAAGGAACGAGCAAAGGCTCAAGAAGAACGGAAGAGGAATATAACAGAGTACAGGAAGCTTTTAGAATCTTGTGACTTTATAAAAGCTAACACACAGTGGCGAAAAGTTCAAGACCGCTTAGAGGCTGACGAAAGATGTTCGCGTCTTGAGAAAATTGACCGTTTGGAAATATTCCAGGACTATTTACGTGATTTAGAGAAGGAAGAGGAAGAGCAGAAGAAGTTACTAAAGGAGGAATTGAGAAAGACAGAACGTAAAAACCGTGATGAATTCCGCAAATTGATGGAAGAGCATGTTGCTGCTGGCATTCTTACAGCAAAAACTCATTGGCGTGATTATCACATGAAGGTGAAAGATTTACCTGCATATCTAGCAGTGGCATCAAACACATCAGGCTCAACTGCAAAAGACTTATTTGAAGATGTTGCTGAAGAGCTAGAGAAACAATATCATGATGAAAAGAGTCGAATTAAGGATGCGGTGAAGTTGGCTAAGATAACATGGTCATCAACCTATACTTTTGAAGAGTTCAAATCAGCTTTATCTATTGACTCTCCTCCAATATCTGATTTTAACTTAAAGCTAGTGTTTGATGAGCTACTAGAGCGGGCTAAGGAGAAGGAAGAAAAGGAGGCCAAAAAACGGAAACGTCTAGCAGATGATTTCCTTCATTTACTATATTCTACTAAGGACATTACTGCATCTTCAAAATGGGAAGATTGTATAACACTTATTGAAGATAGTCAAGAGTTCAGATCTGTTGGAGATGATAACCGTTGCAAGGAAATATTTGAGGAGTACATTACACAACTGAAAGAACAGGCAAAAGAGGGTGAGCGGAAACGGAAAGAGGAGAGGGCAAAGAAGGAAAAGGATAGGGAGGAAAAAGAAAGACGAAAATCTAAGCAAAGAAGGGAAAAAGAAGGAGTTCGCGAAAGAGAGAAAGATAAAGCAGACAGTGACAGTGCCGACTTAACGGAGAAAGGCGATAGTAAAAACAAACGGAGGCAGCATCAAAGTCCTGAGCACACTTCTCATGAATTGGATAAAGAGAGGAGTAAGAAATCTCATGGGCATAGTAGCAGCGACAGGAAGAAATCGAAACGACATTCATCTGGTCATGAATCAGATGAAGGCCGGCATAAAAGACACAAGCGCGACCACCGCGGTGATCCTCACAGAGAAGGTGGTTATGCGGAGGCGGAAGACGATGACTATGGTAAAGATGTTGATAGATGGTAA 3108 0.4302 MSNNPQYPGLQPLRPPGPPIAGSLDPQRSFVPAPMPGQYRPVVPTQQPQQFMPMPSQHYPPVGPSGPMMNVGMPPQNQQPQFPQPIQQLPPRPGQQLQLPPQPQPLPLSVARPNMHMTSESMMPQPDSQVPNGYAPSLGGPGMPLPASYTFGPSSYGQVQTNFSSASQFHPASQIQAPSSSSSQSITSDTVVLSNDEKPSTTSVTPSATGIQPSLANGGSTDWIEHTSSNGVRYYYNKKTKVSSWERPFELMTPIERVDATTNWKEYTSPNGIKYYHNKVTRESKWMIPEELKLARQQVEKAVANGTHTDALPNSHTQPSVTPPVIETAPTAAANSSLIGQGEPSSPVSVAPVVSASTSHPQSEMSSGPSASPHVAPITGMTVAEVELPVNTATISDAAAGSDRASVTNQNDGNNFLVKDTLGSADEVPAEDKEDGKNDSLVEKTNDVASETKADTVSETRADLASETQANVALETKADASSETKTREPLPLVYANKMEAKEAFKALIESVNVGSDWTWDRTMRLIVNDKRYGALKSLGEKKQAFNEYLSQRKKQEAEEKRMKHKKAREDFKKMLEESTELNPSTRWSKAVTIFENDERFKAVERDRDRRDMFDSFLEELINKERAKAQEERKRNITEYRKLLESCDFIKANTQWRKVQDRLEADERCSRLEKIDRLEIFQDYLRDLEKEEEEQKKLLKEELRKTERKNRDEFRKLMEEHVAAGILTAKTHWRDYHMKVKDLPAYLAVASNTSGSTAKDLFEDVAEELEKQYHDEKSRIKDAVKLAKITWSSTYTFEEFKSALSIDSPPISDFNLKLVFDELLERAKEKEEKEAKKRKRLADDFLHLLYSTKDITASSKWEDCITLIEDSQEFRSVGDDNRCKEIFEEYITQLKEQAKEGERKRKEERAKKEKDREEKERRKSKQRREKEGVREREKDKADSDSADLTEKGDSKNKRRQHQSPEHTSHELDKERSKKSHGHSSSDRKKSKRHSSGHESDEGRHKRHKRDHRGDPHREGGYAEAEDDDYGKDVDRW* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 896 1035 - -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 461 479 - -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 399 418 - -
Ahy19g3353 1035 ProSiteProfiles FF domain profile. 704 767 IPR002713 -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 425 460 - -
Ahy19g3353 1035 SMART FF_2 497 551 IPR002713 -
Ahy19g3353 1035 SMART FF_2 564 619 IPR002713 -
Ahy19g3353 1035 SMART FF_2 837 892 IPR002713 -
Ahy19g3353 1035 SMART FF_2 706 767 IPR002713 -
Ahy19g3353 1035 SMART FF_2 632 686 IPR002713 -
Ahy19g3353 1035 ProSiteProfiles FF domain profile. 563 619 IPR002713 -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 336 373 - -
Ahy19g3353 1035 SUPERFAMILY WW domain 251 292 IPR036020 GO:0005515
Ahy19g3353 1035 Gene3D FF domain 830 904 IPR036517 -
Ahy19g3353 1035 ProSiteProfiles FF domain profile. 632 686 IPR002713 -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 990 1035 - -
Ahy19g3353 1035 SUPERFAMILY FF domain 624 693 IPR036517 -
Ahy19g3353 1035 SUPERFAMILY FF domain 558 625 IPR036517 -
Ahy19g3353 1035 Coils Coil 758 785 - -
Ahy19g3353 1035 Gene3D FF domain 497 552 IPR036517 -
Ahy19g3353 1035 SUPERFAMILY WW domain 222 256 IPR036020 GO:0005515
Ahy19g3353 1035 Coils Coil 550 577 - -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 896 980 - -
Ahy19g3353 1035 ProSiteProfiles FF domain profile. 497 551 IPR002713 -
Ahy19g3353 1035 ProSitePatterns WW/rsp5/WWP domain signature. 223 248 IPR001202 GO:0005515
Ahy19g3353 1035 Gene3D - 258 315 - -
Ahy19g3353 1035 Gene3D - 198 257 - -
Ahy19g3353 1035 SUPERFAMILY FF domain 494 552 IPR036517 -
Ahy19g3353 1035 SMART ww_5 259 291 IPR001202 GO:0005515
Ahy19g3353 1035 SMART ww_5 218 250 IPR001202 GO:0005515
Ahy19g3353 1035 ProSiteProfiles WW/rsp5/WWP domain profile. 217 250 IPR001202 GO:0005515
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 1 222 - -
Ahy19g3353 1035 ProSiteProfiles WW/rsp5/WWP domain profile. 258 291 IPR001202 GO:0005515
Ahy19g3353 1035 Coils Coil 819 843 - -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 336 376 - -
Ahy19g3353 1035 Pfam FF domain 499 548 IPR002713 -
Ahy19g3353 1035 Pfam FF domain 842 889 IPR002713 -
Ahy19g3353 1035 Pfam FF domain 636 683 IPR002713 -
Ahy19g3353 1035 Pfam FF domain 708 763 IPR002713 -
Ahy19g3353 1035 Pfam FF domain 566 614 IPR002713 -
Ahy19g3353 1035 CDD WW 262 291 IPR001202 GO:0005515
Ahy19g3353 1035 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 2 1028 IPR039726 GO:0045292
Ahy19g3353 1035 Coils Coil 883 935 - -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 114 132 - -
Ahy19g3353 1035 SUPERFAMILY FF domain 830 899 IPR036517 -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 78 108 - -
Ahy19g3353 1035 SUPERFAMILY FF domain 699 774 IPR036517 -
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 399 486 - -
Ahy19g3353 1035 Pfam WW domain 263 287 IPR001202 GO:0005515
Ahy19g3353 1035 Pfam WW domain 222 248 IPR001202 GO:0005515
Ahy19g3353 1035 CDD WW 221 248 IPR001202 GO:0005515
Ahy19g3353 1035 MobiDBLite consensus disorder prediction 151 222 - -
Ahy19g3353 1035 Gene3D FF domain 697 778 IPR036517 -
Ahy19g3353 1035 Gene3D FF domain 626 696 IPR036517 -
Ahy19g3353 1035 Gene3D FF domain 553 625 IPR036517 -
Ahy19g3353 1035 Coils Coil 677 719 - -
Ahy19g3353 1035 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 2 1028 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3353 Ahy-Chr19 156456131 156466149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3353 K12821 - gmx:100796870 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3353 19 156456131 156466149 Ahy19g3353 19 156456131 156466149 ECH
Ahy19g3353 19 156456131 156466149 Ahy9g2283 9 111787090 111797122 hybridization