Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3348 ATGTTGATGGCACTAACTGTCGCAATAAACAAGTATGCTTCTTCCAACCTTCAAGCACTTCATAAGACACAACAACGAAAGCCACCATCAACGTTAACCACCATTACCAACAACGTTGAACTTGGAAGGAGAAGCCTGATCTTATCCACTTTAATCGCCACCACCCAAGTTCCCGAATCTAGGACCCAGCTACTTCAAAAATATCTCAAGAAATCAGAGGAAAACAAGGACAAAAATGACAAAGAGAGGTTGGAGAGTTATTACAAGCGAAACTACAAAGATTACTTCGATTTGATGGAAGGAACTTTGAGGGCAAAGAATGATGAGCAGCTTTCGGATACAGAAAAGGGTATCCTTGATTGGTTGCAACGTAACAAGTGA 381 0.4094 MLMALTVAINKYASSNLQALHKTQQRKPPSTLTTITNNVELGRRSLILSTLIATTQVPESRTQLLQKYLKKSEENKDKNDKERLESYYKRNYKDYFDLMEGTLRAKNDEQLSDTEKGILDWLQRNK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3348 126 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 46 87 IPR008796 GO:0009522|GO:0015979
Ahy19g3348 126 PANTHER UNNAMED PRODUCT 7 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3348 Ahy-Chr19 156427445 156428291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3348 - - gmx:100800755 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3348 19 156427445 156428291 Ahy19g3348 19 156427445 156428291 ECH
Ahy19g3348 19 156427445 156428291 Ahy9g2287 9 111830067 111831045 hybridization