Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3327 ATGATTCTGAGAAGACTGGGTGACATGACGATATCCAAAAGGAAGTACACTCGAATCGACACTTTGGAGCTGAAGGCACTACTTGGCCGGAGGGTTGGTCATCAGAGAGCTGACAAGTACTTTGATCAACTCAGAAGATTGTTCAGTTCAAAGATCAGCAAATCAGAGTTCGACAGGGTTTGCATCATGGTCATTGGGAGGGAAAACATCCCTCTTCACAACCAGTTCATTAGGGCAATTCTCAAGAATGCTTGTCTTGCCAAATTCCCGCCGCCGCCGAAGCCGAGAGGTTCTGCCAGACTGGGAAGTGTTTCCAGTGTGGAAGTTTCTAATGGGAGGCAAAGCAGCTCTATACTAACACCATCAGGGGATGCATTATCCCGGTTAGCTGCACAAGATCTCAAGTTCAAAGCCCGCCAAAATTCTCTTGGCAAGCAACAAAGTCTGGCATCTGATGAATTTGCCTTCAAGACACAAGAGCAGCAGAGTGCAACTGAACTGAATTCCCTTGACAGTAGAGCTCCTGTTTCTGTTGAAGATGGAGAAGAAGTTAGACAAACGGCTGGAAGCCCCAGCATCCAAAGCAGGAGCCCAGTTACAGCACCCCTTGGTATATCCATGAATTTAGGTTGCAATCGGAAGCTTGCATCAAATGTATCTTTATGTAGTAAATATTATCCCGAGACCTGTCACAGCATGGGAGATCTCCCCGACACGAGATCTTTGAGGAGAAGGTTAGAGCAGAAGTTGGAGAAGGAAGGTTTAACTGTGACAGTGGATTGTGTAAATCTTTTGAATAATGCATTGGATTCATATATGAAGAGGTTGATTGAATCCTCCCTGGTTTTAGCTGGGTCAAGAGTTGGAAACGAGCAAATAAGGCTGCCGAGTCGACAGCTGATTAATTCAAACGGAATGCTACCAAGAAGGTACATGCAAACAGCACCTAGATTGGCCAAAGCATCAATCTTAGATTTTTGTCTTGCGATGGAGCTAAATCCGCAAGTTCTTGGACCAGATTGGCCGATGCAGCTTGAGAGGATTTCCATACGTGCTTCTGAAGAATGA 1068 0.4551 MILRRLGDMTISKRKYTRIDTLELKALLGRRVGHQRADKYFDQLRRLFSSKISKSEFDRVCIMVIGRENIPLHNQFIRAILKNACLAKFPPPPKPRGSARLGSVSSVEVSNGRQSSSILTPSGDALSRLAAQDLKFKARQNSLGKQQSLASDEFAFKTQEQQSATELNSLDSRAPVSVEDGEEVRQTAGSPSIQSRSPVTAPLGISMNLGCNRKLASNVSLCSKYYPETCHSMGDLPDTRSLRRRLEQKLEKEGLTVTVDCVNLLNNALDSYMKRLIESSLVLAGSRVGNEQIRLPSRQLINSNGMLPRRYMQTAPRLAKASILDFCLAMELNPQVLGPDWPMQLERISIRASEE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3327 355 MobiDBLite consensus disorder prediction 103 121 - -
Ahy19g3327 355 MobiDBLite consensus disorder prediction 92 121 - -
Ahy19g3327 355 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 16 281 IPR024738 GO:0070461
Ahy19g3327 355 PANTHER TRANSCRIPTIONAL ADAPTER 1 13 355 IPR024738 GO:0070461
Ahy19g3327 355 MobiDBLite consensus disorder prediction 160 199 - -
Ahy19g3327 355 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 13 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3327 Ahy-Chr19 156292924 156294920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3327 - - gmx:100817344 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3327 19 156292924 156294920 Ahy19g3327 19 156292924 156294920 ECH
Ahy19g3327 19 156292924 156294920 Ahy9g2311 9 111984760 111986763 hybridization