Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3315 ATGGCTTTAGACATCCAAACCTTGGAAGACAGCTATACTGATTCTTGCAGGAGACATGGCGTTTTGCCTAACACTGCTATTTTGTCAAGCCTTCTCAAGGCTGAGCGGAAAAAGTCCTGCCGTGAACTCTGCAGCCTGGAGATTTTAATTGATGACCTTAGGGATATTGATTTTGCTCCACTTCTTGATATATGTACGGACCTTGATAATTCCGAAATCGAAGCTGTTGATGTACGTACTGAATCAGCATGTGTATTAAATGGAGCATATGCATTATCATTGATGCGTGCTATTAAACAAAAGCTTCGAGTAGTCAATCTACAAGATCTGTCTGTTGGAAGGGACTTCTTACGGGATATCTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAAATTTTCACATTTCCGTAAGCTGAACTTGGTGGGGGAGTTCATGCACTTGCACACCCTTAATCTTGATTTCAGTTCTTCGCTTACCAGTTTCCGAGAGGAATGCTTTAATTGCATGCCCCGTCTAATGTGCCTCTCGATGTGTGAGACACGGATTACAAATCTATGGACAACTGTTGCAGCTCTCTCTAAGCTTCCTTCTTTGATTGAACTAAGGTTTCAGTATTGGCAGTGTTGCAATGATGCTGGAATATCTCTTCTCTCAACCAGTGGGAAGTCAGATGACACTGCAGATTGTAGCCTTCTAAATAAAGCTCCATTTGTTGGTGAATTATGCACTGAAACAAGGGAACTGACAGAACCTAACCTAAGTGCTGAAGATCCATTGATAAGTTTTTATTCCTTTGATGAAAATATTCAAAGCATGGTTGAAGATTCATCAGATGATAGTGAAGATGACTTTACTAACCACAATCATAGATCCTGGCAGTCAGATAGCTTTTCGGGGTGGAATTTACAACTACCTTTTCAGAATGAGTTCATGTTACAAAATGAAGATGGAGCAGAGTCATCACAAGGTTCCTTTTCATGGAATATTGCCGATGTTTCTATGAAGTATATGTCTTGTCATACATCACCAATATGCTATGAGAAACATTATAGAGAATTCATGATAGCTTCACTACCAAATTTGAAAATTTTAGATAATCTGCCTATCAGAAAAATTGACAGGGAAAGGGCTAGTGAAATAGTTCCTCAACACTTTGAATACCTTCCATATAAACGGAAGCACAAACAGAGTGTTGTAAGTATCTTACAAACACGGGAAATAAAATCTAGCCACAATAAAGTGCATACTTCTAAGTCTCTGCCATCATATCCTTCTGGAAATTCTCAATATTTTTATACTAGATCACTTTCTGCGGCTAAAATGGGGTCTTCAACTTGGCCTTCCTTGCATCCCCTTTCTCTGTCAGAATGTAATTTGGACAGGAGCTTACGTCCAAGGCAGTTTGAGTACCATCCATCTGACTCCAGCTTGATGGTCTTTGGAACTCTAGATGGTGAAGTAGTTGTCATCAACCATGAGAATCAACATGTTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTCTTGGGTCTTTGTTGGCTCAAGAAATACCCTTCTAAGCTTATAGCAGGTTCCGACAATGGTTCTTTGAAATTGTATAACATCCACCAGACACCTAAAACAACAACTAGCGTATATGGAAATTCTAGTGGTGTTACATTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAATGCCTCGGATGAACTATTCCTTGCAAGTGGTTACTCAAGGAATGTTGCTCTGTATGACATCAACATTGGAAAGCGCTTACAAGTTTTCACTGATATGCATCATGGGCATATTAATGTTGTCAAATTTGCAAATCATTCCCCGTCAATTTTCGCTACTTCCTCGTTTGATCATGATGTCAAGATGTGGGACTTGAGACAGAAACCAATACATCCTTGCTTCACTGCTTCAAGCTCTAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGACCAATATATTCTTGCATCAGCAGTTGATAATGAGGTTAGACAACTTTTGGCTGTTGATGGTAGGCTTCACTTGGTTTTTGATATTGCTTCCACTGGAAGTTCCCAGAACTACACCCGTTCATATTACATGAATGGGAGGGACTACATTATAAGTGGGAGTTGTGATGAACATGCTGTTCGTATTTGCTGTGCTCAAACAGGGAGACGCTTGAGAGATATATCACTTGAGGGAAGAAGCTTAGGAAGTTCCATGTTTGTTCAATCTTTGAGGGGTGATCCTTTCAGGGACTTCAATATGAGTGTGTTAGCGGCCTACATGCGCCCAGGCTCCAAGTCTGAGATTGTCAAGATTAACCTTCTAGCATCTGTTGACCATACCAAGGATGATTTTGATGAGCAACGCCCTTTTGCATTCCAAAGTATGGGAGCTTGA 2412 0.4022 MALDIQTLEDSYTDSCRRHGVLPNTAILSSLLKAERKKSCRELCSLEILIDDLRDIDFAPLLDICTDLDNSEIEAVDVRTESACVLNGAYALSLMRAIKQKLRVVNLQDLSVGRDFLRDISQRGLACQVLTLKFSHFRKLNLVGEFMHLHTLNLDFSSSLTSFREECFNCMPRLMCLSMCETRITNLWTTVAALSKLPSLIELRFQYWQCCNDAGISLLSTSGKSDDTADCSLLNKAPFVGELCTETRELTEPNLSAEDPLISFYSFDENIQSMVEDSSDDSEDDFTNHNHRSWQSDSFSGWNLQLPFQNEFMLQNEDGAESSQGSFSWNIADVSMKYMSCHTSPICYEKHYREFMIASLPNLKILDNLPIRKIDRERASEIVPQHFEYLPYKRKHKQSVVSILQTREIKSSHNKVHTSKSLPSYPSGNSQYFYTRSLSAAKMGSSTWPSLHPLSLSECNLDRSLRPRQFEYHPSDSSLMVFGTLDGEVVVINHENQHVVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYNIHQTPKTTTSVYGNSSGVTFDEFDQLTSVHVNASDELFLASGYSRNVALYDINIGKRLQVFTDMHHGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTASSSRGNVMVCFSPDDQYILASAVDNEVRQLLAVDGRLHLVFDIASTGSSQNYTRSYYMNGRDYIISGSCDEHAVRICCAQTGRRLRDISLEGRSLGSSMFVQSLRGDPFRDFNMSVLAAYMRPGSKSEIVKINLLASVDHTKDDFDEQRPFAFQSMGA* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3315 803 Gene3D Ribonuclease Inhibitor 328 388 IPR032675 -
Ahy19g3315 803 ProSiteProfiles Trp-Asp (WD) repeats profile. 600 635 IPR001680 GO:0005515
Ahy19g3315 803 PANTHER BNAC09G30780D PROTEIN 2 789 IPR046377 GO:0071493|GO:0080008
Ahy19g3315 803 Gene3D - 462 751 IPR015943 GO:0005515
Ahy19g3315 803 SUPERFAMILY L domain-like 128 462 - -
Ahy19g3315 803 Pfam WD domain, G-beta repeat 599 633 IPR001680 GO:0005515
Ahy19g3315 803 SMART LRRcap_2 349 367 IPR003603 -
Ahy19g3315 803 SUPERFAMILY WD40 repeat-like 466 733 IPR036322 GO:0005515
Ahy19g3315 803 Gene3D Ribonuclease Inhibitor 91 228 IPR032675 -
Ahy19g3315 803 SMART WD40_4 638 676 IPR001680 GO:0005515
Ahy19g3315 803 SMART WD40_4 592 633 IPR001680 GO:0005515
Ahy19g3315 803 SMART WD40_4 496 538 IPR001680 GO:0005515
Ahy19g3315 803 SMART WD40_4 554 589 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3315 Ahy-Chr19 156190249 156198411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3315 525 720 Miscellaneous Gene Families AT5G08390 25.701 2.81e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3315 - - gmx:100806443 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3315 19 156190249 156198411 Ahy19g3315 19 156190249 156198411 ECH
Ahy19g3315 19 156190249 156198411 Ahy9g2325 9 112085672 112092037 hybridization