Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3313 ATGGATAAGACGAAGATTGAGGAGGTGATAGAGAAGCAAGTGCTGACGGTGGTGCAGGCCGTTGAGGACAAGATCGACGATGAGATCGCCGCCCTCGACCGCCTAGACGCTGATGACCTAGAAGCCCTGAGAGAGCGCCGCCTCCAACAGATGAAGAAGATGGCCGAGAAGCGGAGCCGTTGGATCTCCCTCGGACACGGCGAATACACCGAGATCCCTTCCGAAAAGGACTTCTTCTCCGTCGTCAAGGCCAGCGAGCGCGTCGTCTGCCATTTCTACCGCGAAAACTGGCCCTGCAAGGTGGTTGATAAACATTTGAGTATATTGGCAAAGCAGCATATCGAGACTCGTTTTGTGAAAATTAATGCTGAAAAGAGTCCTTTTTTGGCTGAGAAGCTCAAGATCATTGTTCTTCCAACTCTTGCCCTCATTAAGAATGCCAAAGTGGATGACTATGTGGTGGGATTCGATGAACTTGGTGGGACTGATGAATTTAGCACAGAGGATTTGGAAGAGAGATTGGCTAAAGCTCAAGTAATCTTTTTTGAGGGTGAATCTTCATCAAGGTCAAGTGCGCAAACTAAAAGAAGTGTTCGGCAGAGCTCAACAGCAGACTCATCGGATTCCGAATGA 633 0.4897 MDKTKIEEVIEKQVLTVVQAVEDKIDDEIAALDRLDADDLEALRERRLQQMKKMAEKRSRWISLGHGEYTEIPSEKDFFSVVKASERVVCHFYRENWPCKVVDKHLSILAKQHIETRFVKINAEKSPFLAEKLKIIVLPTLALIKNAKVDDYVVGFDELGGTDEFSTEDLEERLAKAQVIFFEGESSSRSSAQTKRSVRQSSTADSSDSE* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3313 210 Coils Coil 18 60 - -
Ahy19g3313 210 Gene3D Glutaredoxin 48 181 - -
Ahy19g3313 210 Pfam Thioredoxin 74 156 IPR013766 -
Ahy19g3313 210 CDD Phd_like_TxnDC9 65 175 - -
Ahy19g3313 210 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 210 - -
Ahy19g3313 210 MobiDBLite consensus disorder prediction 184 210 - -
Ahy19g3313 210 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 210 - -
Ahy19g3313 210 SUPERFAMILY Thioredoxin-like 5 177 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3313 Ahy-Chr19 156182412 156184711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3313 - - gmx:100814116 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3313 19 156182412 156184711 Ahy19g3313 19 156182412 156184711 ECH
Ahy19g3313 19 156182412 156184711 Ahy9g2327 9 112118210 112119874 hybridization