Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3309 ATGGCAGTGGAGATTGACGACAAAGACTTGAAAGCCGCCGGCGCTGAACTCTTCGCTGATGGCGGCAATCGCGGTGTTCGCATCCATGGATGGCTGATCGAGTCTCGCACACACTCCATTCTCAACTCCGCAGCTATCCAAGAGTGGGAACATAAACTTGATACTAATCATTTACCGGAAATGGTTTTTGGGGAGAACACTTTGATTCTGAAGCACTTGAGCAGTGGCACCAAAATTCATTTCAATGCGTTTGATGCTCTTTGTGGTTGGAAGCAGGAAGCCTTGCCACCAGTTGAAGTTCCTGCAGCGGCTAAATGGAAGTTTAGAAGCAAGCCTTCTCAGCAAGTAATACTAGATTATGACTATACTTTTACAACACCTTATTGTGGAAGTTGCACAGTTGAGAATGATAAAGATATGAATGCAAAAGAAACTTCTGAGGAAACAAGCAATATCCTTTGGCAAGACTGCAAGGAACAAATTGATTTGGTTGCATTGGCATCCAAAGAGCCTATATTGTTTTATGATGAGGTAGTCCTATATGAGGATGAACTTGCTGACAATGGAGTATCACTTCTTACTGTAAAAGTGAGAGTAATGCCAAGTTCTTGGTTTCTTCTCCTGCGATTCTGGCTTAGAGTTGATGGAGTGCTCATTCGACTGAGGGAAACTCGCATGCATTGTGTATTTGGTGGAAGCACAAATCCCATTATACTTCGGGAGACTTGCTGGAGAGAATCTACATTTGAAGCTTTGTCTGCTAAAGGATACCCTTTTGATGCCGCTACATATAATGATCCAAGCATAATCAGCCAGAGGCTCCCCATCATCATGCATAGGGCTCAAAAGCTTGTTATTTCCTCTTAA 867 0.4314 MAVEIDDKDLKAAGAELFADGGNRGVRIHGWLIESRTHSILNSAAIQEWEHKLDTNHLPEMVFGENTLILKHLSSGTKIHFNAFDALCGWKQEALPPVEVPAAAKWKFRSKPSQQVILDYDYTFTTPYCGSCTVENDKDMNAKETSEETSNILWQDCKEQIDLVALASKEPILFYDEVVLYEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRETRMHCVFGGSTNPIILRETCWRESTFEALSAKGYPFDAATYNDPSIISQRLPIIMHRAQKLVISS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3309 288 Pfam TIP41-like family 61 252 IPR007303 GO:0043666
Ahy19g3309 288 PANTHER GAF/PUTATIVE CYTOSKELETAL PROTEIN 1 285 - -
Ahy19g3309 288 PANTHER TIP41-LIKE PROTEIN ISOFORM X1 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3309 Ahy-Chr19 156148259 156151591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3309 K17607 - gmx:100811660 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3309 19 156148259 156151591 Ahy19g3309 19 156148259 156151591 ECH
Ahy19g3309 19 156148259 156151591 Ahy9g2331 9 112141613 112144943 hybridization