LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g3284	ATGGGTAAGGTGATGTCTCGGTTGGCAAAGAGGTTCTTACCAAAGTATGAATGGAGGATCCCAATGGTGGGTCTTGATTCTTCAGGGAAGACTACCATTCTCTACAAGCTCAAACTGGGGGACACAGTCAGAACCATACCAACTATTGGTTTTAATGTGGAGAGTGTAGAGTACAAAAATGCAAGCTTTACTATCTGGGATGTTGGAGGACAACAGAAGATTCGGCCATTGTGGAGGCATTACTTTCAAAACACCATTGGACTTATCTTTGTGGTGGATAGCAGTGACCGGCACAGAATCATAGAAGCTCGTAATGAACTCCATAATATTCTAACTGATCATGAACTACGCAATGCTATACTACTTGTGTTCGCCAATAAGCAGGACCTCTCAACTGCCATGAGTGTTGCTGAGATTGCTGATAAGCTTGGCTTACATTCGCTTGAAGATCGTAGTTGGTACATTCAGAGCACTTCTGCCATCTCAGGCCAAGGACTCTATCAAGGTCTTGATTGGCTACTTGACAACATATCAACTAGGAAGCATGAGAAATGA	555	0.4324	MGKVMSRLAKRFLPKYEWRIPMVGLDSSGKTTILYKLKLGDTVRTIPTIGFNVESVEYKNASFTIWDVGGQQKIRPLWRHYFQNTIGLIFVVDSSDRHRIIEARNELHNILTDHELRNAILLVFANKQDLSTAMSVAEIADKLGLHSLEDRSWYIQSTSAISGQGLYQGLDWLLDNISTRKHEK*	185

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g3284	184	TIGRFAM	small_GTP: small GTP-binding protein domain	17	143	IPR005225	GO:0005525
	Ahy19g3284	184	Pfam	ADP-ribosylation factor family	7	177	IPR006689	GO:0003924\|GO:0005525
	Ahy19g3284	184	Gene3D	-	4	184	IPR027417	-
	Ahy19g3284	184	ProSiteProfiles	small GTPase Arf family profile.	11	177	-	-
	Ahy19g3284	184	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	14	181	IPR027417	-
	Ahy19g3284	184	PANTHER	ADP RIBOSYLATION FACTOR-RELATED	1	180	IPR024156	GO:0005525
	Ahy19g3284	184	SMART	arf_sub_2	1	181	-	-
	Ahy19g3284	184	PRINTS	GTP-binding SAR1 protein signature	19	42	IPR006689	GO:0003924\|GO:0005525
	Ahy19g3284	184	PRINTS	GTP-binding SAR1 protein signature	74	99	IPR006689	GO:0003924\|GO:0005525
	Ahy19g3284	184	PRINTS	GTP-binding SAR1 protein signature	119	140	IPR006689	GO:0003924\|GO:0005525
	Ahy19g3284	184	PRINTS	GTP-binding SAR1 protein signature	47	71	IPR006689	GO:0003924\|GO:0005525
	Ahy19g3284	184	PANTHER	ADP-RIBOSYLATION FACTOR 2-LIKE ISOFORM X1	1	180	-	-
	Ahy19g3284	184	SMART	sar_sub_1	1	177	IPR006689	GO:0003924\|GO:0005525

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g3284	Ahy-Chr19	155925204	155926542	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g3284	K07937		-	qsu:112035948	282.722

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy19g3284	19	155925204	155926542	Ahy19g3284	19	155925204	155926542	ECH