Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3238 ATGAATATTACTACTATTACTACTATTGTCTCATATCCAGCATCTGCATATGTTGTGAGGTGTTGTTCCAAACATGAAAGGCATAGTAAGCAACAACCAAACAACATCGTGATTAATGGGACTACTCTAAGGTCTTCGGCAGTTAAGGTTGTTGAGTCAGTTGTCGCCTCAACCACTCTTGATCACTCTGTTGTTACTGTTAATGGGAACAATAATGGACAGCGCCAGAATATCCCAACAAAGAAGCAGCTTGTTGATCCTCATAGGCAAGGTCTCATGGTTGAAGGTGGAGTTGGTTATAGACAAACTATTGTTATTAGATCCTATGAAGTTGGACCTGACAAAACTGCAACACTTGAGAGCATCCTCAACCTTCTTCAGGAGACTGCATTAAACCATGTGTGGATGTCTGGACTTCTTGGTGATGGGTTTGGTGCAACTCATGGAATGATAAGGAATGATCTCATTTGGGTTGTCTCAAGAATGCAAGTTCTCATTGATTATTATCCAATTTGGGGAGAGGTAGTTGAAATTGACACATGGGTTGGAGCATCCGGCAAGAATGGAATGCGGCGCGATTGGCTGATCAAAAGTCAGGCAACCGGCCACATTTTTGCTCGTGCAACAAGCACATGGGTGATGATGAACCGAAAAACGAGACGCCTCTCTAAGATGCCTGAAGAGGTGAGGGATGAACTTGTACCTTGGTTTATTGAGAAGCAAGCAATAGAGGAAGAAGCTCCAGAAAAGATTGTCAAATTGAACAAGCAAGCAAAATACATGAACTCTGACTTGAAGCCCAAAAGAAGTGATTTGGACATGAACCAGCATGTTAATAATGTGAAGTATGTACGATGGATGTTAGAGACTATTCCAGACCATGTTCTAGAGGGTCACCAATTATCAGGCATCACACTAGAATACAGAAGGGAATGTGGGAGTGCAGATATAGTTGAATCATTATGTGAACCTGAAGAAGATGAGATGGTTAGTAATTTAATGGAACAACACTACAACACAAGTTTACTCAATGGCTTGTCTTTGGCATCATCATCAGCAGCAGCAGAGATTATAAATGGTGGTGGAGTCCTCACTTGCATTGATCAAATTCAAAGGCCAATAAGGTATACACACCTTCTACAAACCAAAGGAGAGAAACAAAATGATGAAATTGTCAGAGGCAGGACTTCATGGAAGAGGAAGCTCCCTACCATGCATCTTCCACCTAATACTCTATGTGGCATGTAG 1248 0.4159 MNITTITTIVSYPASAYVVRCCSKHERHSKQQPNNIVINGTTLRSSAVKVVESVVASTTLDHSVVTVNGNNNGQRQNIPTKKQLVDPHRQGLMVEGGVGYRQTIVIRSYEVGPDKTATLESILNLLQETALNHVWMSGLLGDGFGATHGMIRNDLIWVVSRMQVLIDYYPIWGEVVEIDTWVGASGKNGMRRDWLIKSQATGHIFARATSTWVMMNRKTRRLSKMPEEVRDELVPWFIEKQAIEEEAPEKIVKLNKQAKYMNSDLKPKRSDLDMNQHVNNVKYVRWMLETIPDHVLEGHQLSGITLEYRRECGSADIVESLCEPEEDEMVSNLMEQHYNTSLLNGLSLASSSAAAEIINGGGVLTCIDQIQRPIRYTHLLQTKGEKQNDEIVRGRTSWKRKLPTMHLPPNTLCGM* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3238 415 Gene3D Hotdog Thioesterase 92 404 - -
Ahy19g3238 415 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 16 402 IPR045023 GO:0006633|GO:0016297
Ahy19g3238 415 Pfam Acyl-ACP thioesterase 99 382 IPR002864 GO:0006633|GO:0016790
Ahy19g3238 415 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 97 243 IPR029069 -
Ahy19g3238 415 CDD 4HBT 100 216 - -
Ahy19g3238 415 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 264 327 IPR029069 -
Ahy19g3238 415 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 16 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3238 Ahy-Chr19 155566566 155569314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3238 84 404 Acyl Lipid Metabolism Gene Families AT1G08510 45.963 6.41e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3238 - - aip:107616154 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3238 19 155566566 155569314 Ahy19g3238 19 155566566 155569314 ECH
Ahy19g3238 19 155566566 155569314 Ahy9g2403 9 112832309 112835413 hybridization