Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3155 ATGATGAATGGCGTTGAGGTCATCATGGACAATAGCAGCACCAGCATCGTTAAACTACCCGATCCTGCGGTGGTGGCGGCGACGACTTCAAGTCCTCTCTCCGCCATTGCCGAGGCCTTTGAACACCTCGCCAAACTCCTCAACCGTGGTGACCTTCCCTTGGACGCCTTCTACGAAGCCTGCTCTTTCGTCTCTGTTCTCTTCAATTGTCTCGGCTTTGCTTTCAAATTCGCCGAATTGGAATACGTCGCCAAGCTAGAAGGACTTATGGAAGCATCACCGGCGTGTGGCACTCTGAAGGATGTAATTGAAGTTGATGTCGCTAGCAAAACGGTTAAATCCCCGGGAAGTTATTCGCGTAATTTGCGCAGAGTTCGCCAGGGTGTTGATCTCGTCAGAGCTATATTCGAACAACTTCTGGCAACTGACGATAGCTGTCTGAAAGAAATAGCTTCAAGTGCGTACGCTCAGATTTGTGCACCGTATCACACATGGGCAGTAAGAACAGCTGTGCATGCTGGGATGTATACACTTCCAACAAGAGACCAGCTTTTCTTGAGGCTCAATGAAACAGAGAAGTCTGCTGAGACGAAGATGAAAAGGTACATCAATGCTGCAACTCCAGTTATAGAATACATTGATAAACTGTACCTTTCAAGAAAGATTCCGTTGAACTGGTGA 681 0.4772 MMNGVEVIMDNSSTSIVKLPDPAVVAATTSSPLSAIAEAFEHLAKLLNRGDLPLDAFYEACSFVSVLFNCLGFAFKFAELEYVAKLEGLMEASPACGTLKDVIEVDVASKTVKSPGSYSRNLRRVRQGVDLVRAIFEQLLATDDSCLKEIASSAYAQICAPYHTWAVRTAVHAGMYTLPTRDQLFLRLNETEKSAETKMKRYINAATPVIEYIDKLYLSRKIPLNW* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3155 226 SUPERFAMILY Glycolipid transfer protein, GLTP 45 223 IPR036497 -
Ahy19g3155 226 Pfam Glycolipid transfer protein (GLTP) 54 189 IPR014830 GO:0005737|GO:0120009|GO:0120013
Ahy19g3155 226 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 27 226 - -
Ahy19g3155 226 Gene3D Glycolipid transfer protein 24 226 IPR036497 -
Ahy19g3155 226 PANTHER ACD11 HOMOLOG PROTEIN 27 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3155 Ahy-Chr19 154487015 154488682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3155 27 226 Acyl Lipid Metabolism Gene Families AT4G39670 61.058 1.31e-94 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3155 - - adu:107467281 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3155 19 154487015 154488682 Ahy19g3155 19 154487015 154488682 ECH
Ahy19g3155 19 154487015 154488682 Ahy9g2473 9 113830333 113831943 hybridization