Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3077 ATGGCAAAGCCAGTTTCAATTGAGGTATGGAACCCAAATGGGAAATACAGAGTTGTTAGCACAAAACCAATGCCCGGAACTCGTTGGATCAATCTCCTTATCCAGCAAGATTGTCGTGTTGAAATATGTACACAGAAGAAAACAATTCTCTCAGTTGAAGACATTATTCAACTAATTGGTGATAAGTGTGATGGAGTTATTGGTCAGTTGACTGAAGACTGGGGAGAAGAGTTGTTCAAAGCTTTGAGCAGAGCTGGAGGCAAAGCTTTCAGTAACATGGCAGTTGGTTATAACAACGTTGATGTCAACGTTGCTACCAAGTATGGTGTTGCTGTTGGAAACACTCCTGGAGTTCTGACTGAGACAACGGCAGAGCTGGCAGCTTCATTGACTTTAGCGGCTGCTAGAAGGATAGTTGAGGCTGATGAGTTCATGAGGGCAGGATTATATGATGGATGGCTCCCTCATCTTTTTGTTGGAAACCTGCTGAAAGGACAAACAGTTGGTGTTATTGGAGCTGGCCGTATTGGATCGGCTTATGCAAGAATGATGGTTGAAGGATTCAAGATGAACCTGATTTACTTTGATCTCTACCAGTCAACTCGACTCGAAAAGTTTGTTACAGCTTATGGTGAATTCTTGAAAGCGAATGGCGAGAAACCAGTGACTTGGAAAAGGGCATCATCCATGGATGAGGTCCTTCAGCAGGCAGATATAATTAGTCTTCATCCTGTATTGGATAAAACCACTTATCATCTGGTTAACAAGGAGAGACTCTCCAAGATGAAGAAGGAAGCAATACTAATAAACTGCAGTAGAGGGCCTGTTATTGATGAAGCTGCACTTGTTGACCATTTGAGGGAGAATCCAATGTTTCGCGTAGGACTCGACGTGTTTGAGGATGAGCCTTACATGAAGCCTGGGCTCTCAGAGATGAAGAATGCTATTGTGGTACCTCACATTGCTTCTGCTTCTAAGTGGACTCGTGAGGGAATGGCCACACTAGCTGCTCTAAATGTTCTGGGTAAGATCAAAGGGTACCCAGTTTGGTTTGATGCCAATAGAGTGGAACCGTTTCTGAATGAGAATGCTCCACCACCAGCTGCATCCCCAAGCATTGTTAATGCAAAAGCTCTTGGTTTGCCAGTTTCAAAGCTATAG 1161 0.4376 MAKPVSIEVWNPNGKYRVVSTKPMPGTRWINLLIQQDCRVEICTQKKTILSVEDIIQLIGDKCDGVIGQLTEDWGEELFKALSRAGGKAFSNMAVGYNNVDVNVATKYGVAVGNTPGVLTETTAELAASLTLAAARRIVEADEFMRAGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGEFLKANGEKPVTWKRASSMDEVLQQADIISLHPVLDKTTYHLVNKERLSKMKKEAILINCSRGPVIDEAALVDHLRENPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKGYPVWFDANRVEPFLNENAPPPAASPSIVNAKALGLPVSKL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3077 386 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 129 322 IPR006140 GO:0051287
Ahy19g3077 386 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 28 350 - -
Ahy19g3077 386 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 346 IPR006139 GO:0016616|GO:0051287
Ahy19g3077 386 Gene3D - 18 346 - -
Ahy19g3077 386 Gene3D - 118 321 - -
Ahy19g3077 386 PANTHER ZGC:136493 28 350 - -
Ahy19g3077 386 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 168 196 IPR029752 -
Ahy19g3077 386 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 16 156 - -
Ahy19g3077 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 120 323 IPR036291 -
Ahy19g3077 386 CDD GDH 16 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3077 Ahy-Chr19 153546906 153549869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3077 K15893 - cpap:110818965 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3077 19 153546906 153549869 Ahy19g3077 19 153546906 153549869 ECH
Ahy19g3077 19 153546906 153549869 Ahy9g2554 9 114639720 114642680 hybridization