Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3058 ATGAAGCAAAGTGAAGGGCTCCATACCAAAATAACACAAAAACATAATGGAGCTTCGATAATTGAGAGACCGAAAGAAAGAGGTACTAGTAACCACCTCCACCAAACGCCACCACCGCGCCGCCCTCCCCGTTCTCTCCTTATTCCGGTAGCGATGGCGGCGACTGCCACGTGGCAGCCACAGGAGCAAGGGTTCAAGGAGATCTGCGGCCTCCTCGAGCAGCAGATTTCGCATTCTTCTTCCGCTGACAAGGCTCAGATTTGGCAGCACCTTCAGCACTACTCTCAGTTCCCCGACTTCAACAATTACCTCGCCTTCATCTTCTCTCGTGCTGAGGGAACATCAGTGGAGGTTAGGCAAGCTGCGGGTCTTTATCTGAAGAATAACCTCAGAAGCACATATAAATCGTTGCTACCTGCATACCAACAGTATGTGAAATCCGAGTTGCTGCCGTGTCTTGGAGCAGCAGATAGGCACATAAGGTCCACTGCTGGAACTATTATTAGTGTTGTCGTTCAATTAGGTGGAGTTTCAGGCTGGCCTGAATTGTTGCAAGCCCTTGTAACTTGCTTGGACAGTAATGATTTGAGTCACATGGAAGGTGCAATGGATGCATTATCCAAGATCTGTGAGGATATTCCCCAAGTACTTGATGCTGAAGTACCTGGGTTAGCAGAGCGCCCTATTAACATATTTCTCCCCAGATTATTTCGGTTTTTCCAGTCACCTCATGCTTCATTAAGAAAGCTGTCATTGGGTTCTGTAAATCAATACATTATGTTAATGCCTACTGCCTTGTACGTATCCATGGACCAATATCTCCAAGGTTTATTTATCCTTTCAAATGACCCTAATTCTGAAGTGCGGAAATTGGTTTGTGCAGCGTTTGTCCAGCTAATTGAAGTTCGTCCATCTTTCTTAGAGCCACATTTAAGGAATGTGATTGAGTACATGTTGCAAGTCAACAAGGACACAGATGATGAAGTCGCCCTTGAAGCCTGTGAATTCTGGTCTGCATATTGTGACGCTCAACTGCCACCTGAAAATTTACGAGAATTCTTGCCTCGTTTAATTCCGATTTTGTTGTCAAACATGGCTTATGCAGATGACGACGAATCTCTTGTTGAAGCTGAGGAAGAAGGATCTCAACCAGATCGAGACCAGGATCTTAAACCGCGATTTCATGTATCAAGGTTTCATGGATCAGATGAAATCGATGATGATGATGATGACGTTGTCAATACATGGAATCTACGGAAATGCAGTGCTGCCGCTCTAGATATTCTCTCAAATGTGTTTGGAGATGAGATCCTTCCAACTTTGATGCCTATTGTTCAGGCCAAGTTGTCAACTGGTGGTGATGATGCTTGGAAAGAAAGGGAAGCTGCTGTCTTGGCTCTTGGGGCGATAGGAGAGGGTTGCATCAATGGTCTTTATCCTCATTTGGCTGAGATTGTGGCATTTCTAATCCCCCTTCTTGATGATAAGTTTCCTTTGATACGAAGTATTTCATGCTGGACACTCTCTCGGTTTAGCAAATTTATTGTTCAGGGTATTGGACACCCAAAAGGCTATGACCAATTTGATAGTGTTCTTATGGGTCTTCTTCGAAGAATTTTGGATGATAATAAGCGGGTGCAAGAGGCTGCTTGTTCAGCTTTTGCAACACTTGAAGAGGAGGCTGCAGAAGAGTTGGCACCACGATTAGAAATTATATTGAAGCACCTGATGCTAGCGTTTGGGAAATATCAGAGACGAAATCTCAGAATTGTATATGATGCCATTGGAACTCTAGCTGAAGCTGTTGGTGGGGAGCTGAATCAGCCTGTTTATCTTGACATTCTCATGCCACCATTAATAGAGAAATGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCTCTCTTGGAATGCTTTACATCTATAGCACATGCATTGGGCACAGGATTCTCTCAATTTGCTGAACCAGTATTTAAGAGGTGCATAAATATAATCCAGACCCAACAATTTGCAAAGGCTGATCCTGTTGCAGCTGGTGTTCAGTATGACAAGGAGTTCATTGTATGCTCTCTTGATCTGCTATCAGGACTAGCAGAGGGTCTTGGCAGTGGAATAGAGAGTCTGGTTTCACAATGTTCCTTGAGGGACCTACTTCTGCATTGCTGTGTGGATGACGCTCCTGATGTTCGACAAAGTGCCTTTGCATTGCTTGGAGACCTTGCTCGAGTATGCCCAATTCATTTGCACCCTCGTTTGTCTGAGTTTCTTGAGGCTGCAGCCAAGCAGCTGGAAATTTCTAAGGTTAAAGAGGCTATTTCAGTAGCAAATAATGCATGCTGGGCTATTGGAGAACTTGCAGTTAAGGTTCGTCAGGAAGTTTCTCCCATTGTTTTAACTGTAATTTCATGCCTTGTCCCAATTCTTCAGCATGCAGAGGGACTCAACAAGTCACTCATAGAAAACAGCGCAATAACACTAGGGAGGCTTGCATGGGTCTGTCCAGAACTTGTATCTCCACATATGGAGCATTTCATGCAACCTTGGTGCACTGCTCTGTCAATGATACGGGATGATGTTGAGAAAGAAGACGCTTTTAGAGGTCTATGTGCTATGGTCAAAGCTAATCCTTCTGGAGCTCTAAGTTCACTTGTGAATATGTGTACAGCCATAGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGAAGTCTGCCAGGTTTTGCATGGATATAAACAGATGCTGCGTAACGGAGCATGGGACCAGTGTATGTCTGCTTTGGAGCCCCCGATAAAAGAAAAGCTTTCGAAATATCAAGTATAA 2829 0.4411 MKQSEGLHTKITQKHNGASIIERPKERGTSNHLHQTPPPRRPPRSLLIPVAMAATATWQPQEQGFKEICGLLEQQISHSSSADKAQIWQHLQHYSQFPDFNNYLAFIFSRAEGTSVEVRQAAGLYLKNNLRSTYKSLLPAYQQYVKSELLPCLGAADRHIRSTAGTIISVVVQLGGVSGWPELLQALVTCLDSNDLSHMEGAMDALSKICEDIPQVLDAEVPGLAERPINIFLPRLFRFFQSPHASLRKLSLGSVNQYIMLMPTALYVSMDQYLQGLFILSNDPNSEVRKLVCAAFVQLIEVRPSFLEPHLRNVIEYMLQVNKDTDDEVALEACEFWSAYCDAQLPPENLREFLPRLIPILLSNMAYADDDESLVEAEEEGSQPDRDQDLKPRFHVSRFHGSDEIDDDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVQAKLSTGGDDAWKEREAAVLALGAIGEGCINGLYPHLAEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQGIGHPKGYDQFDSVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMLAFGKYQRRNLRIVYDAIGTLAEAVGGELNQPVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGTGFSQFAEPVFKRCINIIQTQQFAKADPVAAGVQYDKEFIVCSLDLLSGLAEGLGSGIESLVSQCSLRDLLLHCCVDDAPDVRQSAFALLGDLARVCPIHLHPRLSEFLEAAAKQLEISKVKEAISVANNACWAIGELAVKVRQEVSPIVLTVISCLVPILQHAEGLNKSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCAMVKANPSGALSSLVNMCTAIASWHEIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3058 942 Gene3D - 55 942 IPR011989 -
Ahy19g3058 942 PANTHER TRANSPORTIN 1 ISOFORM 1 58 940 - -
Ahy19g3058 942 Pfam HEAT-like repeat 457 510 - -
Ahy19g3058 942 ProSiteProfiles Importin-beta N-terminal domain profile. 87 155 IPR001494 GO:0006886|GO:0031267
Ahy19g3058 942 PANTHER IMPORTIN BETA 58 940 IPR040122 GO:0006606
Ahy19g3058 942 SUPERFAMILY ARM repeat 58 932 IPR016024 -
Ahy19g3058 942 SMART IBN_N_2 87 155 IPR001494 GO:0006886|GO:0031267
Ahy19g3058 942 Pfam Importin-beta N-terminal domain 88 154 IPR001494 GO:0006886|GO:0031267
Ahy19g3058 942 Pfam HEAT repeat 717 745 IPR000357 GO:0005515
Ahy19g3058 942 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3058 Ahy-Chr19 153360952 153371912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3058 K18752 - gmx:100792702 1656.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3058 19 153360952 153371912 Ahy19g3058 19 153360952 153371912 ECH
Ahy19g3058 19 153360952 153371912 Ahy9g2570 9 114802044 114812954 hybridization