Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3057 ATGGGTAGCTTGAGAAACTCAAAGACACTCCATGACTTGTTTGTGCAAGAGAAGCCTCTCTTCCCCATTATTCAACACTCTCCAACTTCACCCATGAATGAAGATCTTCTCTCTGCTATCTCTTACTGCACCTTTGTCTTCACCTTCACTGACCCTCTTGAATCTCCAGCACAAAGAGATTCCAAGAGGATCCAACTTTCAAGGATCATTTCCATACTCAAATCTTCCAAGAAGCCATTGCAGCACAGAATCTTGGCCCCATTGATCTCAATGATTCAAGCTAATCTCTTTAGGCCACTCCCTCCACCTGCCAACAACCCTTCTTGTTCTTCTTCTTCCTCCTCTTCCTCTTCTTCCGTCTGTGAACTCGCCGACGACGAAGATCCTGTCTCCATATTCTCACCAGTTTGGTCACATCTCCAAATAGTATACGAAATTCTGCTCAGGCTTGTCATCACCATAGACTATGAAGCCTTGAGAGTGTACATGGATCAGTCTTTCCTCCTCAAGCTCCTATCACTCTTCCAATCAGAAGATCCGAGGGAACGCGAGAGCTTGAAGAATGTTTACCACAAGATATACACAAAATTCATCACGGATCGTTCCTTCATGAGGAAGTCAATGAAAGATGTGTTGCTGAACCATGTTTTCGAGATAGAAAGGCATCCGGGGATTGCAGAGTTGCTTGAGATATGGGGAACCATCATAAATGGATTTACCGTGCCACTCAAGGAAGAGCACAAGCTGTTCTTGATGAGAGTTCTGATTCCCCTGCATAAGACAAAGGGGATGCAGGTGTACCATAGGCAACTCGCTTATTGCGTTTCGCAGTTTGTGCAGAAGGAGCCAATGCTTGGTGCAGTTGTTGTTAGAGGGATCCTCAGGTATTGGCCTGTAACCAACACTCAAAAAGAGATCTTGTTCATTGGGGAGTTGGAGGATCTTGTTGACAATATTGACCCTGATCAGTATAGGAAGTTGGCCTTGCCATTCTGTACACAGATTACTAAATGCATTAACAGCTGGAATTCACAGGTGGCAGAGCGAGCGCTGTATGTATGGAACAACGAACAGTTTGTGAAGATGGCGACAATTGGGATGGTGGAAGTGTTTCCGGTGATAGTAGAGGGGATGGAGAGGAACCTCAAGTGGCACTGGAGCAAGAATGTAAGGCAATTAACAGAAAGTGTGAAGGTGATGCTGGAAGAGATGGACCCAGAACTTTATACAAAGGGTCTCATTGACATGCAAAATAAACAAGCAGAGGTACACCAACTTGATATCAGGAGAAAAAAGAGATGGGAGATCCTAGAATTGGAAGCTGCAAAGAACAAATTTCTCAATCCACAACGTTCTATATGTGTCTCTCACTAG 1374 0.4447 MGSLRNSKTLHDLFVQEKPLFPIIQHSPTSPMNEDLLSAISYCTFVFTFTDPLESPAQRDSKRIQLSRIISILKSSKKPLQHRILAPLISMIQANLFRPLPPPANNPSCSSSSSSSSSSVCELADDEDPVSIFSPVWSHLQIVYEILLRLVITIDYEALRVYMDQSFLLKLLSLFQSEDPRERESLKNVYHKIYTKFITDRSFMRKSMKDVLLNHVFEIERHPGIAELLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCVSQFVQKEPMLGAVVVRGILRYWPVTNTQKEILFIGELEDLVDNIDPDQYRKLALPFCTQITKCINSWNSQVAERALYVWNNEQFVKMATIGMVEVFPVIVEGMERNLKWHWSKNVRQLTESVKVMLEEMDPELYTKGLIDMQNKQAEVHQLDIRRKKRWEILELEAAKNKFLNPQRSICVSH* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3057 457 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 5 442 - -
Ahy19g3057 457 Gene3D - 28 439 IPR011989 -
Ahy19g3057 457 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 24 441 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy19g3057 457 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 5 442 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy19g3057 457 SUPERFAMILY ARM repeat 34 420 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3057 Ahy-Chr19 153358772 153361240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3057 K11584 - gmx:100802007 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3057 19 153358772 153361240 Ahy19g3057 19 153358772 153361240 ECH
Ahy19g3057 19 153358772 153361240 Ahy9g2571 9 114812692 114815064 hybridization