Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3051 ATGAACAAGAGGCCCAGAACCACCATCGACAAGCCTCTCCTCGATCTCTGCCATCGAGAGCTTGGTCAGATTTCCAACCGCAATTTCGCTCACCGTCTTGCCGCTTCCGAGGACCTTGTGCTTCGGCTTGATGTGTTGAGGAAGCTGGAAAAGCATAGAGGGTGTGTCAACACAGTTTGCTTCAATGCAGATGGTGACATCTTGGTGTCTGGTTCTGATGACCGCAGGGTCATTCTTTGGGACTGGGAATCTGGCCATATTAAGCTCTCTTTTCATTCTGGTCACACTAACAATGTTTTCCAGGCTAGGATCATGCCCCATTCCGATGATCGAAGCATTGTCACCTGCGCTGCTGATGGACAGGTGAGACATGCTCAAATTCTTGAACGTGGCAGAGTGGAAAATAAGTTGCTGGCCAAGCATCAAGGACGGGCTCATAAGATGGCTATTGAGCCTGGTAGCCCTCATATATTTTACACCTGTGGTGAAGATGGATTAGTACAGCATTTTGATCTGAGAACTGGCACCGCAACAGAACTCTTTACGTGCCAGCCAATTAAGGACAGATGGGATTACATTCCAGTCATCCATCTTAATGCAATTGCAATTGATCCAAGGAATCCAAATCTGTTTGCAGTTGCTGGGTCTGACGAGTATACTCGACTTTATGATATTCGCAAATATAAGTGGGATGGATCCTCCGATTTTGGCCAGCCAGTAAATTTCTTCTGCCCTCCACACTTGATTGGTGATCAACGAGGAGTTGGAATAACAGGCTTGGCATTTTCTGAACAGAGAGAGCTACTAGTATCATACAATGATGAGTATATTTATCTTTTTACACAAGATATGGGCCTGGGGCCTAACCCTGATCTCGGTTCCCCTGTATCTATGAACAGTGATTCAAGTGAAATGGGAGGTAGTCTTGGCTCTGCAGCCTCACTGTCAAACATTTCTGGCTCTGCTGATGAGAAAATCACTCCGCAAGTTTTTAAGGGACACAGGAATTCTGAGACAGTGAAGGGTGTTAACTTTTTTGGGCCTAAGTGTGAGTATGTGGTAAGCGGGTCAGATTGTGGTCGGATTTTCATTTGGAGAAAGAAAGATGGGCAGCTTATTCGTGTCATGGAAGCGGATAAGAATGTTGTGAACTGCATTGAGTCTCATCCTCATACAATGGTTCTTGCAAGCAGCGGAATTGAGTATGACATCAAGATGTGGACTCCAAAGGCACACGAGAAAGCTACTTTGCCCAAAAACATTGAGCAGAAACCCAAGGCTAGGGGCTGGATGTACCGGATAGCTTCTCCTGAAGAACTGATGTTGCAACTGTTTTCACTTCCAAGAAGGAGGGTTAGGACAAACAACAATGGAGAAAATTCCGCTGCGGATCGAGAACTTCTGGAGTTGATCTTGACATTCAACGCTAATAGCGACAGTTCTAATGATGACGACGACGACGATGGCGGAGACACAGTGAGTCAAGAGGACTTGTTCAGTTGA 1503 0.4591 MNKRPRTTIDKPLLDLCHRELGQISNRNFAHRLAASEDLVLRLDVLRKLEKHRGCVNTVCFNADGDILVSGSDDRRVILWDWESGHIKLSFHSGHTNNVFQARIMPHSDDRSIVTCAADGQVRHAQILERGRVENKLLAKHQGRAHKMAIEPGSPHIFYTCGEDGLVQHFDLRTGTATELFTCQPIKDRWDYIPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSSDFGQPVNFFCPPHLIGDQRGVGITGLAFSEQRELLVSYNDEYIYLFTQDMGLGPNPDLGSPVSMNSDSSEMGGSLGSAASLSNISGSADEKITPQVFKGHRNSETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGQLIRVMEADKNVVNCIESHPHTMVLASSGIEYDIKMWTPKAHEKATLPKNIEQKPKARGWMYRIASPEELMLQLFSLPRRRVRTNNNGENSAADRELLELILTFNANSDSSNDDDDDDGGDTVSQEDLFS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3051 500 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED 8 483 - -
Ahy19g3051 500 Gene3D - 36 410 IPR015943 GO:0005515
Ahy19g3051 500 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 8 483 IPR045151 -
Ahy19g3051 500 MobiDBLite consensus disorder prediction 477 500 - -
Ahy19g3051 500 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 49 81 - -
Ahy19g3051 500 SUPERFAMILY WD40 repeat-like 41 407 IPR036322 GO:0005515
Ahy19g3051 500 Pfam WD domain, G-beta repeat 329 365 IPR001680 GO:0005515
Ahy19g3051 500 Pfam WD domain, G-beta repeat 46 81 IPR001680 GO:0005515
Ahy19g3051 500 SMART WD40_4 176 224 IPR001680 GO:0005515
Ahy19g3051 500 SMART WD40_4 131 171 IPR001680 GO:0005515
Ahy19g3051 500 SMART WD40_4 369 408 IPR001680 GO:0005515
Ahy19g3051 500 SMART WD40_4 241 281 IPR001680 GO:0005515
Ahy19g3051 500 SMART WD40_4 42 81 IPR001680 GO:0005515
Ahy19g3051 500 SMART WD40_4 84 126 IPR001680 GO:0005515
Ahy19g3051 500 SMART WD40_4 324 366 IPR001680 GO:0005515
Ahy19g3051 500 ProSiteProfiles Trp-Asp (WD) repeats profile. 49 90 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3051 Ahy-Chr19 153300861 153304763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3051 K11804 - gmx:100791300 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3051 19 153300861 153304763 Ahy19g3051 19 153300861 153304763 ECH
Ahy19g3051 19 153300861 153304763 Ahy9g2577 9 114859430 114863376 hybridization