Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2864 ATGGCCTCTTCGTCTTCTTTTTGTTATCATTCTTCATATAATGCGGTCGCTGCGGTGGCTATCACGCTTCTTTTGTTCGTGTTCGGAGACGCCGCCGACGATGCTCCAAAACTTGATCCATCCTGCGCTAAAGATGTTCAATTGGTGAAGATGAAGCAATGGGTTGATGGCAATGTTGTGAATTCCGGGTACGGTGGCATGAGTGCAATGTTTGGTGCTCAGTTTCCCAAGGAAGTCGGTCAGAGTCCCAAATCTCCTCTTGTTTTTGCCAATCCTAGAGACTGTTGTGTCCCACCAATTACTAAGTTACTTGTTGGATCAGTAACTTTATGTCAGCGTGGTACTTGCGACTTCACAACTAAAGCTGCAATTGCACAGGCAGCAGGTGCAGTTGCCGTATTGGTCATAAATGAGTCGGACGACCTTTTCTCAATGGAGTGTTCCAATAGCTCTAGAGTAGACATTTCAATCCCAGTTGCAATGATATCAAAGACAGCAGGAGATGATCTCGACAATGAGTTGACATCTGGAAAGAAAGTGGAACTTTCGATATATGCTCCAACTCGCCCACTTTTAGACTATTCAGTTGCAGTTTTGTGGTTGATGGCTGTCGGAACAGTTATATGCGCTTCAACATGGGCAGATATAACAGCTGCTGATTGTGATGAACGCTACAATGAATTGTCTCCCAAGGGATCTTTCAAATCCGAAACAATGAAAGATGAGGAGGACATTGTTAACATAGACACAAAGGGTGCTATTATCTTTGTCATTTCGGCATCCACTTTTCTTGTGCTACTATTTTTCTTCATGTCGTCTTGGTTTATCTGGGTGCTGATTGTACTTTTCTGCATTGGTGGTGTTGAGGGGATGCACAATTGTATTGTGAGCCTCGTTTTAAGAGTATTTCCAAAACTTGGACGGAATATAGTGAAGGGCATTTGTTTGATGATAACAATCTTGCAGTTGGCACGATTACCTAATATTAAGGTTGCTCGAGGTGACAAGGCTGGTGGGGAAGCAATTCCTATGCTTTTGAGGTTTCCTCGTCCACACGATCCTTGGAAAGGTTATGACATGATTGGATTTGGAGACATTCTCTTCCCTGGCTTGCTTGTTTGCTTTGCTCGTAGATTTGACAAAGAGAACAACAAGAGGTCAGTGAATGGATATTTTCTTTGGTTGGTAATTGGCTATGGCGTCGGCCTTTTTCTAACATATCTTGGGCTATACTTGATGAAGGGTCATGGACAACCAGCACTTCTCTACCTTGTTCCATGTACCTTGGGTACGGCTGTCATATTGGGATGTATAAGAGGAGAAATGAGGAGTCTTTGGGATTACAAACCAAACTTGCCTCCCTCCAAAGTGCCTCCAGAAGTGTAA 1386 0.4351 MASSSSFCYHSSYNAVAAVAITLLLFVFGDAADDAPKLDPSCAKDVQLVKMKQWVDGNVVNSGYGGMSAMFGAQFPKEVGQSPKSPLVFANPRDCCVPPITKLLVGSVTLCQRGTCDFTTKAAIAQAAGAVAVLVINESDDLFSMECSNSSRVDISIPVAMISKTAGDDLDNELTSGKKVELSIYAPTRPLLDYSVAVLWLMAVGTVICASTWADITAADCDERYNELSPKGSFKSETMKDEEDIVNIDTKGAIIFVISASTFLVLLFFFMSSWFIWVLIVLFCIGGVEGMHNCIVSLVLRVFPKLGRNIVKGICLMITILQLARLPNIKVARGDKAGGEAIPMLLRFPRPHDPWKGYDMIGFGDILFPGLLVCFARRFDKENNKRSVNGYFLWLVIGYGVGLFLTYLGLYLMKGHGQPALLYLVPCTLGTAVILGCIRGEMRSLWDYKPNLPPSKVPPEV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2864 461 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE PROTEIN 311 332 - -
Ahy19g2864 461 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE PROTEIN 16 310 - -
Ahy19g2864 461 SMART psh_8 244 439 IPR006639 GO:0004190|GO:0016021
Ahy19g2864 461 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE PROTEIN 329 452 - -
Ahy19g2864 461 PANTHER SIGNAL PEPTIDE PEPTIDASE 16 310 IPR007369 GO:0004190|GO:0016021
Ahy19g2864 461 Pfam PA domain 85 170 IPR003137 -
Ahy19g2864 461 PANTHER SIGNAL PEPTIDE PEPTIDASE 329 452 IPR007369 GO:0004190|GO:0016021
Ahy19g2864 461 SUPERFAMILY PA domain 104 168 IPR046450 -
Ahy19g2864 461 Pfam Signal peptide peptidase 241 305 IPR007369 GO:0004190|GO:0016021
Ahy19g2864 461 Pfam Signal peptide peptidase 329 449 IPR007369 GO:0004190|GO:0016021
Ahy19g2864 461 Gene3D - 53 187 - -
Ahy19g2864 461 PANTHER SIGNAL PEPTIDE PEPTIDASE 311 332 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2864 Ahy-Chr19 151035433 151042800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2864 107 224 Miscellaneous Gene Families AT4G20110 31.496 2.24e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2864 K09597 - gmx:100782203 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2864 19 151035433 151042800 Ahy19g2864 19 151035433 151042800 ECH
Ahy19g2864 19 151035433 151042800 Ahy9g2750 9 116405210 116413039 hybridization