Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2844 ATGGCTTCCAACAAGAGAAGTAACACTCATCAAGCATTAGCATTGCTCCTGTTCTTCCTCCTCACCCTCTCCTCTGCACATGCCAAAGGTGGCATAGCCATCTACTGGGGCCAGAACAATGGCGACGGTACCTTAACCTCCACATGTGACACCGGAAACTTTGAGATTGTGATCCTCGCCTTTCTCTACACTTTCGGTTGTGGCAGAACTCCAGATTGGAACTTTGCTGGCCACTGTGGGCCATGGTCCCCTTGTGACAAACTCGAACCAGAAATTAAACATTGCCAAAGCAACGGTGTGAAGGTGTTCCTCTCCCTTGGAGGAGCCGTTGGGCCCTACTCCTTATGCTCACCGGAAGATGCCAAGAACGTCTCCGACTACCTTTACAACAACTTCCTCACTGGCCAAAAGGGTCCATTAGGGAGTGTGTACCTTGATGGCATTGATTTCGACATTGAAGGTGGTGGTGTGAACCTTTATTGGGATGACTTGGCTAGAGAACTCGATACACGCAGAAAACAAGACAGGTACTTTTACTTGTCGGCAGCACCACAATGTTTCTTCACAGATTACTACCTTGATACCGCCATTAGAACTTGGCTTTTCGATTACCTCTTCATCCAATTCTACAACAACCCTCCATGCCAATATAGTAACGGCGACGCATCTCTGCTCATATCTTCATGGAATACATGGACCTCCTATGTGAAGCTCAATAACACGGTGTTTATGGGACTACCCGCTGCACCTGATGCAGCTCCCAGCGGTGGCTATATTTCACCGCAAGATCTGTGTACTAAGGTTCTTCCAATCATCAAGCACACTCCTAACTATGGTGGCGTCATGCTTTGGGATAGGTTCCGCGATGTTACTAACCACTACAGCGATCAAATCAAAGATTGTGTTAAAGTTGATGATAATGTTAGGGTTTCACAAACATTGATGGCAACGTTATCAAACACTATAACTGAATGTGTATCTGCAGCTTTCAACCGCATCATGCCGAAACTAAGACCCTTTTAG 1023 0.4653 MASNKRSNTHQALALLLFFLLTLSSAHAKGGIAIYWGQNNGDGTLTSTCDTGNFEIVILAFLYTFGCGRTPDWNFAGHCGPWSPCDKLEPEIKHCQSNGVKVFLSLGGAVGPYSLCSPEDAKNVSDYLYNNFLTGQKGPLGSVYLDGIDFDIEGGGVNLYWDDLARELDTRRKQDRYFYLSAAPQCFFTDYYLDTAIRTWLFDYLFIQFYNNPPCQYSNGDASLLISSWNTWTSYVKLNNTVFMGLPAAPDAAPSGGYISPQDLCTKVLPIIKHTPNYGGVMLWDRFRDVTNHYSDQIKDCVKVDDNVRVSQTLMATLSNTITECVSAAFNRIMPKLRPF* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2844 340 Gene3D Glycosidases 27 317 - -
Ahy19g2844 340 PANTHER III ACIDIC ENDOCHITINASE, PUTATIVE-RELATED 11 299 - -
Ahy19g2844 340 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Ahy19g2844 340 SUPERFAMILY (Trans)glycosidases 29 298 IPR017853 -
Ahy19g2844 340 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 305 IPR001223 GO:0005975
Ahy19g2844 340 CDD GH18_hevamine_XipI_class_III 30 300 IPR045321 -
Ahy19g2844 340 Pfam Glycosyl hydrolases family 18 32 289 IPR001223 GO:0005975
Ahy19g2844 340 PANTHER ENDOCHITINASE 11 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2844 Ahy-Chr19 150718254 150720856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2844 16 302 Glycoside Hydrolase AT5G24090 50.512 3.00e-94 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2844 K01183 - gmx:547449 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3623 15 158994274 158995704 Ahy19g2844 19 150718254 150720856 ECH
Ahy19g2844 19 150718254 150720856 Ahy19g2844 19 150718254 150720856 ECH