Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2739 ATGAAAATCCTCACTAGCTTAGGAATATTATTGTTTCTCAATGTCATTCTAGTTACTTGCCAGGCAATGGGGCACCATAAGTTTGTGGTGAGAGATGCTCCCTTCACAAAGCTTTGCAGTGCAAAGAACATCTTAACAGTAAATGGAGAATTTCCAGGGCCAACATTGTATGTTACGAAAGGAGAAAGCATAATTGTTGATGTGTATAACAGAGCAAACTATAACATCACTATTCATTGGCATGGAGTGAACCAACCAAGATATCCATGGTCCGATGGCCCTGAATTCATCACTCAGTGTGCCATTCAACCTGGTGGTTTGTTCTCTCAAAAGGTTATCTTTTCTGAAGAGGAAGGCACACTTTGGTGGCATGCTCACAGTGATTGGTCTCGTGCTACTGTTCACGGTGCTATTGTCATTAAACCCAAGCCTGGAAATACATATCCATTTCCAATGCCAGATAGAGAGGTCCCCATTATACTAGGTGAATGGTGGAAGGAAGACATTGTCCAAGTTTTCAATAACTTTGAAACGGGGGGAGGAGATCCTGTTGTTTCAGATGCTTATACTATCAATGGCCAACCTGGTGATCTTTATAATTGCTCAAACAATGAAACCTTCAAACTAAATGTGGAACATGGCAAGACATATCTTCTGAGAATGGTGCATGCTGGAATGCAAGACCTTCTCTTCTTTGCAATTGCGCAGCACCAATTGACAGTGGTGGGAAGCGATGGAAGCTATGTGAAGCCATTCAAAGTGGATTACATAACAATATCACCAGGTCAAACCATGGATGTGTTGCTTGAAGCTAATCAACCTTTGGATCGTTATTACATGGCTGCCAAAGTGTATTCAAGTGCTTCCAATGTTGCATTTGACAACACAACCACCACAGCCATTCTGCAATACGAAAAGGGAAAACAAATTATTCCATCATTTTCATCAAGAACCCCTCACATGCCTTCACTTCCATCTTCCAATGACACCAATGCATCTATCAACATGATAAGTCAAATGAGAAGCTTAGCAGATGAAGCACATCCAATTGATGTGCCATTGAACATAACCACCAACCTGTTCTACACAGTTTCGGTGAATACATTACCATGTTCAACATGCGAAGGTAGTCATATACCAGGGAACCGCCTTGCAGCAAGTGTAAATAACATAAGCTTCCAATTGCCATCGGGAAACAACATTTTGAATGCTTACTATAACCACCTTCAAGGTGTATATACACAAGATTTTCCAGATGTGCCACCAGAACTATTTGATTTCACTTCTTCCAATTTGTCCACATTTCTTAGAACTCCATCGGTAGATACAGAGGTGAAGGTGCTTGAGTATGGGTCCACGGTGGAGCTTGTTCTTCAAGGGACTAATTTGCTGGCTGGTACTGAGCATCCAATGCACTTTCATGGTCATAGTTTCTATGTAGTTGGATGGGGATTCGGAAACTTTGACAAAGATAAAGATCCTTTCACTTATAATCTTGTTGATCCTCCTTATCAGAATACCGTCGCTATACCCAAAAATGGATGGGTAACCATAAGATTCAAGGCACAAAATCCAGGTGTGTGGTTCATGCATTGCCACTTAGAGCGACATGTGAGTTGGGGAATGGCTATGACTTTCATTGTCAAAGATGGAAAGAATCCTGAAGAGCAGATGTTGCCACCACCACGAGACATGCCACACTGTCAAAATATTCAGTCATTAATACAAAAATTAGAGTCATTCTTTTTTTAG 1752 0.411 MKILTSLGILLFLNVILVTCQAMGHHKFVVRDAPFTKLCSAKNILTVNGEFPGPTLYVTKGESIIVDVYNRANYNITIHWHGVNQPRYPWSDGPEFITQCAIQPGGLFSQKVIFSEEEGTLWWHAHSDWSRATVHGAIVIKPKPGNTYPFPMPDREVPIILGEWWKEDIVQVFNNFETGGGDPVVSDAYTINGQPGDLYNCSNNETFKLNVEHGKTYLLRMVHAGMQDLLFFAIAQHQLTVVGSDGSYVKPFKVDYITISPGQTMDVLLEANQPLDRYYMAAKVYSSASNVAFDNTTTTAILQYEKGKQIIPSFSSRTPHMPSLPSSNDTNASINMISQMRSLADEAHPIDVPLNITTNLFYTVSVNTLPCSTCEGSHIPGNRLAASVNNISFQLPSGNNILNAYYNHLQGVYTQDFPDVPPELFDFTSSNLSTFLRTPSVDTEVKVLEYGSTVELVLQGTNLLAGTEHPMHFHGHSFYVVGWGFGNFDKDKDPFTYNLVDPPYQNTVAIPKNGWVTIRFKAQNPGVWFMHCHLERHVSWGMAMTFIVKDGKNPEEQMLPPPRDMPHCQNIQSLIQKLESFFF* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2739 583 TIGRFAM laccase: laccase 24 568 IPR017761 GO:0046274|GO:0048046|GO:0052716
Ahy19g2739 583 Pfam Multicopper oxidase 156 306 IPR001117 -
Ahy19g2739 583 ProSitePatterns Multicopper oxidases signature 1. 526 546 IPR033138 -
Ahy19g2739 583 Pfam Multicopper oxidase 418 551 IPR011706 GO:0005507|GO:0016491
Ahy19g2739 583 CDD CuRO_2_LCC_plant 157 304 IPR034285 -
Ahy19g2739 583 SUPERFAMILY Cupredoxins 378 570 IPR008972 -
Ahy19g2739 583 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Ahy19g2739 583 SUPERFAMILY Cupredoxins 150 344 IPR008972 -
Ahy19g2739 583 CDD CuRO_3_LCC_plant 412 551 IPR034289 GO:0005507
Ahy19g2739 583 Gene3D - 372 579 IPR008972 -
Ahy19g2739 583 Pfam Multicopper oxidase 33 143 IPR011707 GO:0005507
Ahy19g2739 583 PANTHER MULTI-COPPER OXIDASE 11 568 IPR045087 -
Ahy19g2739 583 PANTHER LACCASE 11 568 - -
Ahy19g2739 583 Gene3D - 33 149 IPR008972 -
Ahy19g2739 583 SUPERFAMILY Cupredoxins 25 167 IPR008972 -
Ahy19g2739 583 Gene3D - 154 345 IPR008972 -
Ahy19g2739 583 ProSitePatterns Multicopper oxidases signature 2. 531 542 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2739 Ahy-Chr19 148816732 148819408 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2739 K05909 - qsu:112034097 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2739 19 148816732 148819408 Ahy19g2739 19 148816732 148819408 ECH
Ahy19g2739 19 148816732 148819408 Ahy9g2853 9 117663024 117665344 hybridization