Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2434 ATGTGGGAGCATATGTGGTGCCTTGTTTGCTGCAACAAAGAAGAAATGCAAAAGATGAAGAACCTTGGGAGCATTGGAAGCAGTGGAAGGCTATCCACAGAAGAGTGTGAGGATGAGCAGATTTCAAAGCTGCCCATTTCCACATTTCAATCCAAGGAAGAAGAGATTGAGAGGAAGAAGACTGAGGTGAGAGAGAAGGTTGAACTCCAGCTTGGCCGCGCCGAGGAAGAGACGAGGCGCTTGGCACACATTTGGGAAGAGCTTGAAGTGCTAGATGATCCTTTGAGGAAAGAAGTTGCAATTGTGCGCAAGAAGATTGACTTGGCTATCAGAGATTTGAAGCCATTGGGACAAAACTACCAGAAGAAGGAGAAAGAGTATAAAGAGGCCTTGGAAGCTTTCAATGAAAAGAACAAAGAGAAATCTCATCTTGTAACCACACTAGTTGAGCTGTTAACTGAGAGTGAAAGACAGAGGATGAAGAAACTGGAAGAGCTATGCAAGACCATAGATTCACTGTCAAGGAAACAATAA 534 0.4401 MWEHMWCLVCCNKEEMQKMKNLGSIGSSGRLSTEECEDEQISKLPISTFQSKEEEIERKKTEVREKVELQLGRAEEETRRLAHIWEELEVLDDPLRKEVAIVRKKIDLAIRDLKPLGQNYQKKEKEYKEALEAFNEKNKEKSHLVTTLVELLTESERQRMKKLEELCKTIDSLSRKQ* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2434 177 PANTHER RAB6-INTERACTING PROTEIN GORAB 16 172 IPR007033 -
Ahy19g2434 177 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 16 172 - -
Ahy19g2434 177 Pfam Transcriptional activator 20 172 IPR007033 -
Ahy19g2434 177 Coils Coil 117 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2434 Ahy-Chr19 140861108 140862657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2434 - - gmx:100794044 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1831 16 92990182 92992011 Ahy19g2434 19 140861108 140862657 ECH
Ahy19g2434 19 140861108 140862657 Ahy19g2434 19 140861108 140862657 ECH
Ahy19g2434 19 140861108 140862657 Ahy9g1991 9 107694713 107696077 hybridization