Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1918 ATGGCATCATCATCATCATCATCATATATTGTGGCCACTTTATCACCTAATAACTCTCTACTTTTCTCACAAACCAGACTCACTGGTGCTAACTGGGTTCATTTTCCATCAACTAGTAGGAGGAGAGTAGGTAGGGTAAGAGCAGAGACTGAAAGTATGGCTACTGTCACAGAGAAACTTGGCATCAAGGTTGAGAGGAACCCTCCTGAGACAAAACTCACTGAACTTGGTGTCAAGCAATGGCCTAAATGGGGTTGCCCTCCAAGCAAATTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTTTGGAAGGGAAGGTGAAGGTTACACCAAGTGGGGCAGATGAGTCAGTTGAGATTGGCGCCGGTGACTTGGTTGTGTTTCCAAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGGTGTAGACAAGCACTACAAATTTGAGTAA 453 0.4481 MASSSSSSYIVATLSPNNSLLFSQTRLTGANWVHFPSTSRRRVGRVRAETESMATVTEKLGIKVERNPPETKLTELGVKQWPKWGCPPSKFPWTYEAKETCYLLEGKVKVTPSGADESVEIGAGDLVVFPKGMSCTWDVSVGVDKHYKFE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1918 150 SUPERFAMILY RmlC-like cupins 69 147 IPR011051 -
Ahy19g1918 150 CDD cupin_TM1112-like 81 149 - -
Ahy19g1918 150 Pfam EutQ-like cupin domain 74 147 IPR008579 -
Ahy19g1918 150 PANTHER OS04G0445200 PROTEIN 40 150 - -
Ahy19g1918 150 PANTHER OS04G0445200 PROTEIN 40 150 - -
Ahy19g1918 150 Gene3D Jelly Rolls 48 149 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1918 Ahy-Chr19 110726274 110728780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1918 K06995 - gmx:100499968 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1918 19 110726274 110728780 Ahy19g1918 19 110726274 110728780 ECH
Ahy19g1918 19 110726274 110728780 Ahy9g1557 9 83941155 83943784 hybridization