Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1342 ATGGCCACCCATAACAACCACCTCAATGGTGATGCTATATCCAACCGTCACGTGTCAAAGAAACCAAAGCTCGCTCCAACCGCTGCCGTCGCCGTCATCACCGAGGACGACCTCCACTCGGAATTCTCCCATCACGATCCCGCCGTCGCGCGCATCAACAACGGCAGCTTCGGATGCTGCCCTGCCTCCGTCATCGCCGCCCAGCGCCGGTGGCAGCTCCTCAACCTGCGGCAGCCTGACCATTTCTACTTCAACGAGCTCAAGAAAGGGATCCTCCACTCCCGCACCATCATAAAAGACCTCGTCAACGCGGAACACGTCGACGAGATCTCCATCGTCGACAACGCAACCACCGCCGCAGCCGTCGTCCTCCAACAAACCGCCTGGGCCTTCCACGAGGGAAGGTTCCAGAAAGGCGTCGACGCCGTTGTCATGCTCCACTACGCATACGGCTCCGTCAAGAAGTCCGTGGAGGCGTACGTGTCACGCGCCGGTGGCGACGTCATCCAGGTCCCCCTCCCCTTCCCCCTAACTTCCCCCAACGAAATCATAACAGAATTCCGTTGCGCATTGGAAAGAGCGAAATCTGGCGGGAAAACGGTTAGACTGGCAGTTATCGATCACGTGACTTCGATGCCCAGCGTGGTGATCCCCGTGAAGGAGTTAGTTAGAATCTGCAGAGAGGAAAGTGTGGATAAAGTTTTTGTGGATGCGGCCCACGGGATAGGGTGTACCAGCGTTGACATGCAAGAAATTGGGGCTGACTTTTACACCAGCAATTTGCACAAGTGGTTCTTTTGTCCACCTTCGATTGCGTTCTTGTACAGTCGCAAGAACTCCAGTTCTTGCGATCTGCATCACCCTGTGGTGTCTCATGAGTACGGCAACGGTTTAGCCGTTGAGAGTGCATGGATAGGGAATAGGGACTATAGTGCACAGCTTGTGGTGCCTGATGTGCTGGAATTTGTGAACAGGTTTGAAGGGGGAATTCAGGGGATTAAGAGGAGGAACCATGAAAAGGTTGTTGAGATGGGTCAGATGCTGGCTGCGGCTTGGGGGACACATCTCGGAAGCCCGCCGGAGATGTGTGCGAGTATGGCCATGGTTGGATTGCCGGCTTGCTTGGGGATTAGGTGTGATTTGGATGTGGCTAGGTTGAGGACTCATTTGAGGGATGAATTTGGGGTTGAGGTCCCTATTTATTTTCGAGCACCGGCAGCCGCGATCTCCGCTGGGGATGTGGTCACCGGCTATGCTCGGATTTCTTATCAGGTGTACAACAAAGTTGAGGACTATTATAAGTTCAGAGATGCCGTTGACCAGCTTGTGAACAGTGGCTTTACTTGTGCTCAGCTTTCAACTTGA 1365 0.5414 MATHNNHLNGDAISNRHVSKKPKLAPTAAVAVITEDDLHSEFSHHDPAVARINNGSFGCCPASVIAAQRRWQLLNLRQPDHFYFNELKKGILHSRTIIKDLVNAEHVDEISIVDNATTAAAVVLQQTAWAFHEGRFQKGVDAVVMLHYAYGSVKKSVEAYVSRAGGDVIQVPLPFPLTSPNEIITEFRCALERAKSGGKTVRLAVIDHVTSMPSVVIPVKELVRICREESVDKVFVDAAHGIGCTSVDMQEIGADFYTSNLHKWFFCPPSIAFLYSRKNSSSCDLHHPVVSHEYGNGLAVESAWIGNRDYSAQLVVPDVLEFVNRFEGGIQGIKRRNHEKVVEMGQMLAAAWGTHLGSPPEMCASMAMVGLPACLGIRCDLDVARLRTHLRDEFGVEVPIYFRAPAAAISAGDVVTGYARISYQVYNKVEDYYKFRDAVDQLVNSGFTCAQLST* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1342 454 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 9 453 - -
Ahy19g1342 454 PANTHER L-CYSTEINE DESULFHYDRASE 9 453 - -
Ahy19g1342 454 Pfam Aminotransferase class-V 85 279 IPR000192 -
Ahy19g1342 454 MobiDBLite consensus disorder prediction 1 21 - -
Ahy19g1342 454 SUPERFAMILY PLP-dependent transferases 41 443 IPR015424 -
Ahy19g1342 454 Gene3D - 73 314 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1342 Ahy-Chr19 28165196 28168454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1342 K22207 - gmx:100786129 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1342 19 28165196 28168454 Ahy9g1060 9 21754276 21757189 hybridization
Ahy16g0849 16 15156801 15161921 Ahy19g1342 19 28165196 28168454 PCT
Ahy6g0505 6 6143640 6148770 Ahy19g1342 19 28165196 28168454 PCT
Ahy19g1342 19 28165196 28168454 Ahy16g0849 16 15156801 15161921 PCT
Ahy19g1342 19 28165196 28168454 Ahy6g0505 6 6143640 6148770 PCT