Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1172 ATGGAAAAGAAAGAGCAAAAGATTATGGTGGCTGTGGATCAGAGTGAGGAAAGCATGCATGCACTGTCATGGTGCCTAAGCAATCTTATTTCAGATACCAATAAAAAGAAGCTTCTTCTGCTCCATGTCAAGCCTCCTCCTGCTATCTGCTCCTTCGACACTGCAGGGTATGTGTTTTCCCCTGAAGTTATTGCTGCTATGGAAAAGTACAGTATGGAGCTTGCTAATTCAGTAATGGATAAAGCTGAAGCCATTTGCAGAAATTTGAACGCCGCCGATATAACTATGGAGAGAGTAATTGAGATGGGAGATGCAAAGAATGTAATTTGCAGTACAGTGCAGAAGTTAGATGCTGACACTTTGGTCATGGGAAGCCATGGTTATGGATTCTTCAAGAGAACACTCCTTGGAAGTGTGAGCGACCACTGTGCCAAGCATGCAAAGTGTCCTGTTATAATCGTCAAACAACCATGA 474 0.4304 MEKKEQKIMVAVDQSEESMHALSWCLSNLISDTNKKKLLLLHVKPPPAICSFDTAGYVFSPEVIAAMEKYSMELANSVMDKAEAICRNLNAADITMERVIEMGDAKNVICSTVQKLDADTLVMGSHGYGFFKRTLLGSVSDHCAKHAKCPVIIVKQP* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1172 157 PRINTS Universal stress protein signature 115 127 IPR006015 -
Ahy19g1172 157 PRINTS Universal stress protein signature 133 155 IPR006015 -
Ahy19g1172 157 PRINTS Universal stress protein signature 5 23 IPR006015 -
Ahy19g1172 157 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 156 - -
Ahy19g1172 157 Gene3D HUPs 1 157 IPR014729 -
Ahy19g1172 157 CDD USP_Like 7 154 - -
Ahy19g1172 157 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 156 - -
Ahy19g1172 157 Pfam Universal stress protein family 6 155 IPR006016 -
Ahy19g1172 157 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1172 Ahy-Chr19 21938320 21940688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1172 2 44 Receptor kinase-like Gene Family AT5G35380 48.837 2.33e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1172 - - gmx:100306535 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0895 16 16023879 16026459 Ahy19g1172 19 21938320 21940688 ECH
Ahy19g1172 19 21938320 21940688 Ahy19g1172 19 21938320 21940688 ECH
Ahy16g0700 16 12881401 12882704 Ahy19g1172 19 21938320 21940688 ECH