Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1171 ATGGGAAACCAACTCTCCCTTCGTCCTTCAAATGCAGCCACAGCGAAAATCGTCTTGTGGGACGGTTCCATTCATGACTATGAGCAACCTCTAACGGTGGCAGAGCTCATGCTAGAGCACCCGCAGCAGGTAGTTGTGGAATTCGATTCGGCTTTGACGACGAAACAGAAGCGGCCAACTCCATTGCCGGCCGACAAGATTCTTCAGATGAACAAGGTCTACCTCATGCTTCCCGTCAAGAAAGGGAAGCCTGTCTCTTTGACCAGCCACGACGGCCGCCGCATTCTCTTGGCCGTTAACTCTGCCTTGCGTTCCAAGGAAATCGTCTGTTCCTCCAGGCTTGTTCCGTGGCTCTTGCGTCTTGCCGGCGGGGAGGGTGGGACTAGAGACGCCGGTGGAGGGGTCCGAAGAAGGGAGGAAGAGACGGTGAGGTGCGAGTTTTCAGAGTTTTTGATGCCGGAGATGATGAGGCCGGAGTATTTGAGTAGGCAACTTTCAGCTGGGAGTAATGGGTGGAGGCCAAGCTTGGACACCATTAAGGAGAAGAAGATTGAAAAGAAACTTAATCACTGGTTGTTCATCAATGGTGTTTAA 594 0.5236 MGNQLSLRPSNAATAKIVLWDGSIHDYEQPLTVAELMLEHPQQVVVEFDSALTTKQKRPTPLPADKILQMNKVYLMLPVKKGKPVSLTSHDGRRILLAVNSALRSKEIVCSSRLVPWLLRLAGGEGGTRDAGGGVRRREEETVRCEFSEFLMPEMMRPEYLSRQLSAGSNGWRPSLDTIKEKKIEKKLNHWLFINGV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1171 197 Pfam PADRE domain 1 181 IPR025322 -
Ahy19g1171 197 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 188 - -
Ahy19g1171 197 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1171 Ahy-Chr19 21844383 21856143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1171 - - gmx:100527719 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1171 19 21844383 21856143 Ahy9g0910 9 16636021 16645203 hybridization
Ahy16g0698 16 12877232 12877966 Ahy19g1171 19 21844383 21856143 PCT
Ahy6g0635 6 7745269 7746141 Ahy19g1171 19 21844383 21856143 PCT
Ahy19g1171 19 21844383 21856143 Ahy16g0698 16 12877232 12877966 PCT
Ahy19g1171 19 21844383 21856143 Ahy6g0635 6 7745269 7746141 PCT