Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1166 ATGGCTGTCACCACTTCCTATCTAAATATCACTGAAAAGAAGCACTGGTGGCTCACCAACCGAAGGATTGTTGAGAAATACATAAAGGACGCTCGTAGCCTCATTGCAACGCAAGAGGAGAGCGAGATCATTTCCGCTCTGAGTTTGTTGGACGCTGCTCTAGCCTTGTTTCTGAGACTAGAGCAAGCACTGGAACTCAGAGCGAGGTGTCTACTCTCCTTACGGAGGTTCAAAGACGTAGCAGATATGCTTCAGGATTACATCCCAAGCCTCAGAATTTCCGACGAAGATTCTTCTTCTTCTTCTTCTTCTTCTTATAGCGGTTTCTCTTCGCAGAGTCTTTCAAGAGAAGGCGTGAAGCTTCTTTCTTCTTCGTCCTTTTCTTCTTCATCTGATTCTTCTTCTTGTTCTTTTTCTCCTTCACCTGGTAGAGATCAGAGCTTCACGTGCTTCTCTGTTTCGCACTTGAAGAAGAAGCTCATGGCTGCGATCTGTAAGAGTTGCGAGAAGGAAGGGCATTGGAGATACTTAGTACTTGGCAAAGCATGCTACCACTTAGGCCTAATGGAAGACGCAATGATTCTCCTCCAAACCGGCAAGCGCCTAGCTACGGCCGCCTTCCGCCGCGAAAGCATCTGCTGGTCTGACGACAGCTTCTCCCTCTCCCTCTCCACCGCCGCCACAGCACCACCGTCCAGCCCTCTCACCGAATCGGAGTCCATAACCCAGCTCCTGTCCCACATCAAGCTCCTCCTCCGTCGTCGGGCCGCAGCACTGGCCGCCCTTGACGCCGGGGTCCACACGGAGGCCATCCGCCACTTCTCGAAGATCATCGAGTCCCGGCGCGGTGTGACGCCACAGGGCTTCCTCTCGCAGTGCTACGCGCATCGTGCCTCCGCCCAGCGGCACGCATGGCGAATAGCGGACGCAATCGCGGACTGTAACCGCGCGCTGGCGCTGGAAGCGACGAGCATCGAAGCACTCCACACACGCGCGTCGGTGCTTGAAATGATTAAGTGCCTTCCTGATTCTCTGCATGACCTTGAACACTTAAAGCTTCTCTACAACTCCATTCTTCGTGACCGCAAGCTCCCTGGACCCGCCTGGAAGCACCACAATGTTAGGTACGTAGAGATCCCGGGAAGGCTCTGCACTCTGAGCACCAAGATCAAAGAACTCAAGCAGAGAGTGGCAAATGGCGAAACAGGAAACAACGTTGATTACTACGCTTTGATTGGTTTGAGGCGTGGGTGTTCTCGGTCGGAGCTTCAGAGGGCACATCTTTTGCTCTGTTTGAAGCATAAGCATGAGAAGGCTCTGAGCTTCATTGATCGCTGCGAGCTTGCAGACCAACGAGACATTGAGGATGTTAAGGAAAGGGCCAAGATGTCTGCAACGTTGTTATACAGGTTGATTCAGAAAGGTTATGCTGAAATTATGGCGAACATCACAAACGAGGAAGCTTTGAAGGAACAGAGGAAGAGGGCTTTGCACGATGATAATAATAGTAATGAAGATAGTAATGAGAGTGGGTTGGTTTGTTCATCTGCTTCGACTACAAATCCTTCGTTGCTTCAAGGAGTGTTTTGTAGGGACCTAACTATGGTTGGGAACTTACTTTCTCAAGCTGGGTTTAACCCTTCCATTTCCGTGAAGTATGAGGCTTTGAGTTGCTAG 1677 0.5081 MAVTTSYLNITEKKHWWLTNRRIVEKYIKDARSLIATQEESEIISALSLLDAALALFLRLEQALELRARCLLSLRRFKDVADMLQDYIPSLRISDEDSSSSSSSSYSGFSSQSLSREGVKLLSSSSFSSSSDSSSCSFSPSPGRDQSFTCFSVSHLKKKLMAAICKSCEKEGHWRYLVLGKACYHLGLMEDAMILLQTGKRLATAAFRRESICWSDDSFSLSLSTAATAPPSSPLTESESITQLLSHIKLLLRRRAAALAALDAGVHTEAIRHFSKIIESRRGVTPQGFLSQCYAHRASAQRHAWRIADAIADCNRALALEATSIEALHTRASVLEMIKCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKHHNVRYVEIPGRLCTLSTKIKELKQRVANGETGNNVDYYALIGLRRGCSRSELQRAHLLLCLKHKHEKALSFIDRCELADQRDIEDVKERAKMSATLLYRLIQKGYAEIMANITNEEALKEQRKRALHDDNNSNEDSNESGLVCSSASTTNPSLLQGVFCRDLTMVGNLLSQAGFNPSISVKYEALSC* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1166 558 MobiDBLite consensus disorder prediction 125 144 - -
Ahy19g1166 558 MobiDBLite consensus disorder prediction 492 515 - -
Ahy19g1166 558 Gene3D Tetratricopeptide repeat domain 223 364 IPR011990 GO:0005515
Ahy19g1166 558 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 558 - -
Ahy19g1166 558 PANTHER - 1 558 - -
Ahy19g1166 558 SUPERFAMILY TPR-like 256 450 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1166 Ahy-Chr19 21664359 21670975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1166 - - gmx:100800231 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1166 19 21664359 21670975 Ahy19g1166 19 21664359 21670975 ECH
Ahy19g1166 19 21664359 21670975 Ahy9g0907 9 16500341 16506840 hybridization
Ahy16g0696 16 12791118 12793685 Ahy19g1166 19 21664359 21670975 PCT
Ahy6g0637 6 7837595 7840135 Ahy19g1166 19 21664359 21670975 PCT
Ahy19g1166 19 21664359 21670975 Ahy16g0696 16 12791118 12793685 PCT
Ahy19g1166 19 21664359 21670975 Ahy6g0637 6 7837595 7840135 PCT