Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1075 ATGGCTTACGCATCTCGTCTTCTCAATCATTCTCGAAAGTTGAGAAATGCTTCGAACTTGGTACACCATGACCCTGCCCTTTTGGTTCGTTGGTTTTCCAGCGATGCTCAAACCTCTATCAGCAGAAAAAGCGATTTGTGGAAAATGCGGTCCCAGGGTTATATAACTTCAACAAGAAACACTGTCTCTGGAACAGTCCCGAATTTCACTAGAAACCTCTCTGTGGCTACCATGAAAATGGATTCCATTGGTGGATCCTTGTTTAATGGAGGGATTTCACGAGGTTCACACGTCCAGACAAGGAGAGGTTATGCATCAGCAGCAGATCTCCCTCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCAACAATGACAGAGGGTAACATTGCTAGATGGTTGAAGAAAGAAGGTGATAAAGTCTCACCAGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCTACTGTTGAAATGGAATGCATGGAGGAAGGTTATCTTGCAAAAATAATACGTGGGGATGGGGCAAAAGAAATTAAAGTTGGTGAGGTAATCGCTATAACTGTTGAAGAAGAGGGGGATATTGCGAAGTTTAAAGATTACCAACCTTCAGCATCAGAGCCTGCTACTGCTGCCCCTAAAGAAAAATCTGCTGCTCCTCCACCAAAGAAACAGGCGGTTGAGGAACCTACCCGAGAACCTGAGCCAAAGGTTTCCAAACCTACTGCACCACCACCTTCAGGAGATCGCATTTTTGCTAGTCCTCTGGCTAGAAAGTTGGCTGAAGAGAAAAATGTACCACTCTCAAGCATTAAAGGAACAGGACCAGAAGGGCTCATTGTCAAGGGTGACATTGATGATTACTTGGCTTCTGGGGCTAAAGAAGTTTCAGCACCATCAAGGGCAAAGGTTGCAACAGATGCAGCATTGGATTATACCGATGTTCCTATCTCTCAGATAAGGAAGATCACAGCTTCCCGTCTATTATTGTCAAAACAAACTATTCCTCATTACTATCTGACAGTAGATACATGTGTTGACAAACTCATGAGTTTGAGGACCAAACTCAATTCATTGCAAGAAGCCTCCGGTGGAGCCCGGATATCAGTTAATGACCTTGTCATCAAGGCTGCTGCTTTGGCTCTACGTAAAGTTCCTCAATGTAACAGTTCATGGACAGATGATTATATTCGCCAGTATCATAATGTGAACATTAATGTTGCAGTGCAGACTGATCATGGATTATTTGTTCCAGTCATCAGGGATGCAGACAAGAAAGGCCTCTCTGCAATTGGTGAAGAGGTCAAACAATTGGCAAAGAAAGCCAAAGAAAACAGCTTGAAACCCCAAGATTATGAGGGAGGAACATTTACAGTGTCTAACCTGGGAGGGCCATTTGGTGTCAAGCAGTTCTGTGCAATCATCAATCCTCCTCAAGCAGGCATTCTTGCAGTTGGATCTGCTGAGAAGAGAGTTGTACCGGGTTCAGGTCCTGAAGAGTTCAAGTTTGCTTCCTTCATGGCTGTGACTCTTAGCTGTGATCATCGCGTAATAGACGGTGCAATTGGTGCTGAATGGTTAAAAGCATTCAAGGGCTATATTGAAAATCCAGAGTCCATGTTGTTGTAA 1629 0.4401 MAYASRLLNHSRKLRNASNLVHHDPALLVRWFSSDAQTSISRKSDLWKMRSQGYITSTRNTVSGTVPNFTRNLSVATMKMDSIGGSLFNGGISRGSHVQTRRGYASAADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIRGDGAKEIKVGEVIAITVEEEGDIAKFKDYQPSASEPATAAPKEKSAAPPPKKQAVEEPTREPEPKVSKPTAPPPSGDRIFASPLARKLAEEKNVPLSSIKGTGPEGLIVKGDIDDYLASGAKEVSAPSRAKVATDAALDYTDVPISQIRKITASRLLLSKQTIPHYYLTVDTCVDKLMSLRTKLNSLQEASGGARISVNDLVIKAAALALRKVPQCNSSWTDDYIRQYHNVNINVAVQTDHGLFVPVIRDADKKGLSAIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQAGILAVGSAEKRVVPGSGPEEFKFASFMAVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1075 542 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 311 542 IPR001078 GO:0016746
Ahy19g1075 542 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 138 167 IPR003016 -
Ahy19g1075 542 SUPERFAMILY CoA-dependent acyltransferases 311 542 - -
Ahy19g1075 542 Gene3D - 297 540 IPR023213 -
Ahy19g1075 542 Pfam Biotin-requiring enzyme 115 187 IPR000089 -
Ahy19g1075 542 Gene3D - 246 296 IPR036625 GO:0016746
Ahy19g1075 542 PANTHER DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX 55 542 - -
Ahy19g1075 542 TIGRFAM PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 115 542 IPR006257 GO:0004742|GO:0006090|GO:0045254
Ahy19g1075 542 Pfam e3 binding domain 251 285 IPR004167 GO:0016746
Ahy19g1075 542 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 3 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL 55 542 - -
Ahy19g1075 542 SUPERFAMILY Single hybrid motif 112 207 IPR011053 -
Ahy19g1075 542 Gene3D - 108 214 - -
Ahy19g1075 542 CDD lipoyl_domain 114 187 - -
Ahy19g1075 542 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 252 289 IPR004167 GO:0016746
Ahy19g1075 542 MobiDBLite consensus disorder prediction 198 252 - -
Ahy19g1075 542 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 245 290 IPR036625 GO:0016746
Ahy19g1075 542 ProSiteProfiles Biotinyl/lipoyl domain profile. 113 189 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1075 Ahy-Chr19 17868271 17877456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1075 1 542 Acyl Lipid Metabolism Gene Families AT1G54220 68.297 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1075 K00627 - gmx:100778218 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1075 19 17868271 17877456 Ahy9g0829 9 13683183 13692394 hybridization