LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g1052	ATGGTAGCTGGTAGTGGGAGTGGTTCTCCGAGGGCTGAGGGTGGAAACGGTAATAACACACAGATACTGTCGGCGAGAGTGCGAAGAACCATTCAATCCATCAAAGAAATCGTTGGGAACCATTCTGATGCTGATATCTATGTCGCTCTCAAGGAAACAAACATGGATCCTAACGATGCTGCTCAGAAATTGCTCAACCAAGATCCATTCCATGAGGTGAAGAGAAGGAGAGACCGAAAGAAGGAGCCTCAAAATGTTGGGAACCCAGTCCCTGTCAACCCACGAAGGAATTCTGAGAATGTTGGTCAAGGAAAGAAATATAATACCCCTTTTGAACATAATAATGTTCGAAGAACAAACTATTCTCGGAATACCTTACCTGGCATCAGCAGAGAGTTTCGAGTTGTCAGAGACAATAGAGTAAATCACATATATAAAGAAGTAAAGCCTCCTTCAGTGCAATGCTCAACATCTACCAATGAGCAGTCAATTGTGAACACTTCTGAAAAAGGATCATCAACTGCTTATAGTAATCAAAGGTCATCTGGTGCAAGAAATATATCGCAGGCTCTAAATGGTCCTCCTAATTCACATGGAAGATACTCAAAAGATGCTATTCCAAATGCCAGTGACAGAAAATTTACACCTGCTAAGGAAGGTGCAACATCAAATGTAGCATCACAAGAGCAACCAACAAAGCCCAATAACAACCAGAATTCTACAACTGTGGCATCAACCAGTTCTGCTATTGGGGTTTATTCCTCTTCAACAGATCCAGTTCATGTCCCCTCCCCTGATTCCAGATCATCAGGTGTTGTAGGGGCGATTAGGCGTGAAGTGGGGGTTGTTGGTGGACGTAGACAGGCTTCAGACAACTCAGTCAAACAATCATCCGTTCCTAGTTCTTTTGCTAATACTCTTACTGGAAAAGATGTTAGCAGGCCATCCATGAGCAATCAATATAACGGCCGACCACATCAACAACTTGTGGGACATCAGAGAGTTACTCAGCATAATAAAGAGTGGAAACCTAAATCAAGCCAGAAGTTGAGTAATAATGGTCCCGGAGTGATTGGAACACCTAAAAAGCTTGCGTCAACTCCAGTGGAAAACTCTAAGGATACGGAATCAGATACTGCAAAGCTGCAAGATAAACTTTCCCAAGTAAATATCAGTGAGAACCAGAATGTGATTATTGCACAGCATATTCGAGTTAGAGACACTGATCGCGCTCTGCTGACCTTTGGTAGCATTGGGACAGAATTTAATTCCTCAAGACATCAACCTAACAATATAGGAGTTGCTGAGAAATCAAATGAGGAATCTACTGCCAGCTTGACAGTGCCTGCTTCAGAGTTGTCCGCTGACGATGTTCCTGGGAGCAAGCAGGTAGACTTGCAGGAAGACCACATCAGAAATCCTGTATCTGACTCTCCAGCATCTGGTGCTACTGAGCTGCAATTGCATGATAACAGAGAATCCTCAAGTCCTCAGAATCAGGGTCCTTATGGCAGTATTAGGTTGGTTCGTGAAAGTAGTCCTTCTTATGTGCCTGCTGAGTCACAGCATCAGCAAGATTCTCATGATATGCCTGGATTTGCAGCCTATGATCCTCCAACTGGTTACGACATGCCTTATTTCAGACCCACAATAGATGATACTCTCCGAGGGCAGGGTCTACCATCACCTCAAGAGGGCTTAAGTTCCCATGTGGCCAACAGTGTTCCCGCTTCCACAGTTTCCATGGTGCAACCTCCTGTGGCACAGATGTATCCACAAGTACATGTTTCACATTTTGCTAATCTTATGCCGTATCGTCAGTTCTTGTCACCAGTCTATGTTCCGCCAATGGCTATGCCTGGATATTCAAGTAATCCTCCCTATCCTCATCCAACAAATGGCAGCAGTTACTTGTTGATGCCTGGAGGTAGTTCCCATCTTAATGCGAACAGCCTTAAATACGGAGTTCAGCAGTTCAAGCCTGTTCCTGCTGGAAGTCCTACTGGGTTTGGAAATTTTGCTAATCCAACCGGGTATGCCATGATGCCTCCTGGTGTGGTTGGGGGTGCAACAGCTTTAGAAGATTCTTCTCGTGTCAAGTACAAAGATAATCTTTATGTTCCAAATCCTCAGGCCGAGACATCAGAAATCTGGATACAGAATCCAAGGGAGCTTCCTGGCATGCAATCGGCTCCATACTATAACTTGCCAGGGCAAACACCTCATGGTGCCTATATGCCATCGCACACCGGCCATGCCTCGTTCAATGCTGCAGCAGCAGCAGCAGCTCAATCTTCACACATGCAGTTTCCTGGCATGTATCACGCCTCGCCACAGCCAACTGCAATGGCTAACCCTCATCATTTAGGACCAGCGATGGGAAACAATGTTGGAGTTGGAGTGGCTCCAGCTGCACCTGGACCACAGGTTGGTGCATATCAGCAGCCCCAGTTAGGTCACCTCAATTGGACTACAAATTTCTGA	2484	0.4541	MVAGSGSGSPRAEGGNGNNTQILSARVRRTIQSIKEIVGNHSDADIYVALKETNMDPNDAAQKLLNQDPFHEVKRRRDRKKEPQNVGNPVPVNPRRNSENVGQGKKYNTPFEHNNVRRTNYSRNTLPGISREFRVVRDNRVNHIYKEVKPPSVQCSTSTNEQSIVNTSEKGSSTAYSNQRSSGARNISQALNGPPNSHGRYSKDAIPNASDRKFTPAKEGATSNVASQEQPTKPNNNQNSTTVASTSSAIGVYSSSTDPVHVPSPDSRSSGVVGAIRREVGVVGGRRQASDNSVKQSSVPSSFANTLTGKDVSRPSMSNQYNGRPHQQLVGHQRVTQHNKEWKPKSSQKLSNNGPGVIGTPKKLASTPVENSKDTESDTAKLQDKLSQVNISENQNVIIAQHIRVRDTDRALLTFGSIGTEFNSSRHQPNNIGVAEKSNEESTASLTVPASELSADDVPGSKQVDLQEDHIRNPVSDSPASGATELQLHDNRESSSPQNQGPYGSIRLVRESSPSYVPAESQHQQDSHDMPGFAAYDPPTGYDMPYFRPTIDDTLRGQGLPSPQEGLSSHVANSVPASTVSMVQPPVAQMYPQVHVSHFANLMPYRQFLSPVYVPPMAMPGYSSNPPYPHPTNGSSYLLMPGGSSHLNANSLKYGVQQFKPVPAGSPTGFGNFANPTGYAMMPPGVVGGATALEDSSRVKYKDNLYVPNPQAETSEIWIQNPRELPGMQSAPYYNLPGQTPHGAYMPSHTGHASFNAAAAAAAQSSHMQFPGMYHASPQPTAMANPHHLGPAMGNNVGVGVAPAAPGPQVGAYQQPQLGHLNWTTNF*	828

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	68	84	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	90	112	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	151	196	-	-
	Ahy19g1052	827	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	307	827	-	-
	Ahy19g1052	827	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	13	312	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	289	314	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	1	23	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	220	264	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	151	273	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	471	506	-	-
	Ahy19g1052	827	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	13	312	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	477	506	-	-
	Ahy19g1052	827	Pfam	GBF-interacting protein 1 N-terminal	25	82	IPR009719	-
	Ahy19g1052	827	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	307	827	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	66	112	-	-
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	285	314	-	-
	Ahy19g1052	827	SUPERFAMILY	UBA-like	26	84	IPR009060	GO:0005515
	Ahy19g1052	827	MobiDBLite	consensus disorder prediction	338	380	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g1052	Ahy-Chr19	17243749	17250850	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g1052	-		-	gmx:100807606	1167.53

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy19g1052	19	17243749	17250850	Ahy19g1052	19	17243749	17250850	ECH
	Ahy19g1052	19	17243749	17250850	Ahy9g0808	9	13229672	13236707	hybridization