Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1028 ATGGCTGAAACTCCAAACGCCTCAACGTCCTCACCAAAACCCTCTACCATGGACCCTCAATCCCAGCCTTCCCAAAATCCAAACCCAAACCCAAACCCAATCCCTAATTCAAATCCCAACCCTTCAATGTCAGCGCAATCGCCTTCGATCTCAAACTTCTCTCAACAACAATCCCCTTCAATTCACAATATCTCTTCCCCTTCTCTCCCCCCTCTCCCCCAAGACCCTCAGCAATCACAGCAACAGCAACCACAACAGCAGCAGCAGCAACAGCTTCAGCAACAATCACAGCAACAGCAACAAACGCAACAGCAGCAACAACAGCAGCAGCAACAGTCGCTTGTGATGCAGCAGTCTCAGGGGATGACCATGAACCCTATGTCCCAATTCCAACTCCAGCAGACCCTCCAGCGGTCCCCTTCGATGACACGGGTCAATCAAATGCAGTCTCAGCAGCAGCAGCAGCAGCTTGGCGTTATGCGGCAGCAGGCTGGGTTGTACGGCGGCCAAATGAATTTCGGCGGTTCTGCTTCGGCGGCAGGTCAGCTGCAGAATCAGCAGCAGCAGCAGCAACAACAGCAGTTGGGAGGGTCGAGTCTTTCGCGCTCGGCTCTGATGGGGCAGAGTGGGCACTTCCCTATGTTGTCTAGTGCTGGAGCAGCGCAGTTTAACTTGTTGTCCTCGCCAAGGCAGAAGGGTGGGCTAGTCCAGGGATCACAATTCTCATCAGCTAATTCTGCTGGACAGCCACATCAAGGAATGCAAGCAATGGGGATGATGGGGACGCCAAATCTCAGCTCGCAACTAAGAGCTGCTAATGGAGCCATGGCATATGCTCAGCAATTGCGAATAAGTCAAAGCCAGATGAGGCAGAATTCACTTACCTCTCAGCAGGTTCAAGGCTTACCAAGACCGTCGTCATCGTTGGCCTTTATGAATTCCCCGTTATCTGGCTTGTCTCAGAATGGACAGCCTGCAATGATTAATTCTTTAACACAGCAACAGTGGTTTAAGCAAATGCCTGCAATGTCAGGTCCTGGTTCACCATTGCGTCTTCAACAGCAGAGGCAGCAACAACTGGCTTCACCTGCGGCTCAACTGCAACAAAGTATGACCTTGAATCCACATCAATTGTCCCAGTTAATGCAGCAACAAAAACCAATGGGGCAGCCTCAGCTGCAGCAACTGCAACAGCAGCAGCAGCAGCAGCAGCCACCCCAGCAGCAGCAACAGCAACAACTTCTACAGCAGCAGCAGCAACAACCGTCTCAACTTCAAGCATCTGTTCATCATCATCAGCAGCAGCAGTCTCCAAGGATGTCAGGACCCATGGGCCAAAAGTCACTTAGTCTTACAGGATCACAGCCAGATGCTACTGCATCTGGCGCAACTACCCCAGGGGGAAGCTCAAGCCAAGGAACTGAAGCGACAAACCAACTCCTTGGAAAAAGAAAGATACAGGAGTTAGTTGCACAGGTTGATCCACAGTGTAAGCTGGACCCTGAAGTTATAGACCTTTTTTTAGAGCTTGCTGATGACTTCATTGATGCAGCGACAACACATGGTTGCATGTTGGCAAAACACAGAAAGTCATCCACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTGAAGATACCAGGATATTCAAGTGAAGATAAAAAGAATCAAGGCAAACCTCTACAAAATGACCTACACAAGAGGCGCTTGGATATGATTCGTTCATTGATGGAATCATCACATGCCGAACCAAGTATGAACAATTCTAAAGACATAAGTAGACAGGGCATTCCTAACCCTGTTGGTGGCCACCACCTAATAAGGCCCCTGGGTTCAGAGCAATTGCTTTCTCATTCAACTAGCTCTCAAATGCTACAGCAAATAACAAGGTTTCAATAG 1914 0.4922 MAETPNASTSSPKPSTMDPQSQPSQNPNPNPNPIPNSNPNPSMSAQSPSISNFSQQQSPSIHNISSPSLPPLPQDPQQSQQQQPQQQQQQQLQQQSQQQQQTQQQQQQQQQQSLVMQQSQGMTMNPMSQFQLQQTLQRSPSMTRVNQMQSQQQQQQLGVMRQQAGLYGGQMNFGGSASAAGQLQNQQQQQQQQQLGGSSLSRSALMGQSGHFPMLSSAGAAQFNLLSSPRQKGGLVQGSQFSSANSAGQPHQGMQAMGMMGTPNLSSQLRAANGAMAYAQQLRISQSQMRQNSLTSQQVQGLPRPSSSLAFMNSPLSGLSQNGQPAMINSLTQQQWFKQMPAMSGPGSPLRLQQQRQQQLASPAAQLQQSMTLNPHQLSQLMQQQKPMGQPQLQQLQQQQQQQQPPQQQQQQQLLQQQQQQPSQLQASVHHHQQQQSPRMSGPMGQKSLSLTGSQPDATASGATTPGGSSSQGTEATNQLLGKRKIQELVAQVDPQCKLDPEVIDLFLELADDFIDAATTHGCMLAKHRKSSTLESKDLLLHLEKNWDLKIPGYSSEDKKNQGKPLQNDLHKRRLDMIRSLMESSHAEPSMNNSKDISRQGIPNPVGGHHLIRPLGSEQLLSHSTSSQMLQQITRFQ* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1028 637 MobiDBLite consensus disorder prediction 585 600 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 130 157 - -
Ahy19g1028 637 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 23 413 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 232 252 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 381 475 - -
Ahy19g1028 637 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 23 413 IPR037794 GO:0000124|GO:0005669|GO:0046695
Ahy19g1028 637 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 408 635 IPR037794 GO:0000124|GO:0005669|GO:0046695
Ahy19g1028 637 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 408 635 - -
Ahy19g1028 637 Pfam Transcription initiation factor TFIID subunit A 482 549 IPR003228 GO:0005669|GO:0006352
Ahy19g1028 637 MobiDBLite consensus disorder prediction 340 367 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 1 102 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 24 38 - -
Ahy19g1028 637 CDD TAF12 481 549 IPR003228 GO:0005669|GO:0006352
Ahy19g1028 637 MobiDBLite consensus disorder prediction 1 23 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 175 206 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 585 611 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 170 208 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 39 68 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 348 367 - -
Ahy19g1028 637 SUPERFAMILY Histone-fold 479 550 IPR009072 GO:0046982
Ahy19g1028 637 MobiDBLite consensus disorder prediction 232 253 - -
Ahy19g1028 637 Coils Coil 85 112 - -
Ahy19g1028 637 MobiDBLite consensus disorder prediction 75 102 - -
Ahy19g1028 637 Gene3D Histone, subunit A 476 550 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1028 Ahy-Chr19 16659518 16668944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1028 K03126 - gmx:100783017 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1028 19 16659518 16668944 Ahy19g1028 19 16659518 16668944 ECH
Ahy19g1028 19 16659518 16668944 Ahy9g0786 9 12631836 12640023 hybridization