Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1024 ATGGCTGCTGAGTCACCAAGTTCCGTTCGTAAAGTGGTTGTTCATCTGAGAGCCACTGGTGATGCTCCTATTCTCAAGCAATCTAAATTCAAGATAGCAGGAGCTGATAAATTTGCAAAGGTTATAGACTTTCTTAGACGGCAACTCCACAGGGAAACATTGTTTGTATATGTCAACAGTGCTTTTTCACCCAATCCTGATGAATCGATCATTGATTTGTATACTAATTTTGGTTTTGATGGCAAATTGGTGGTCAACTACGCATGTTCTATGGCATGGGGCTAA 285 0.407 MAAESPSSVRKVVVHLRATGDAPILKQSKFKIAGADKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDESIIDLYTNFGFDGKLVVNYACSMAWG* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1024 94 PANTHER UBIQUITIN-LIKE PROTEIN ATG12B 1 94 - -
Ahy19g1024 94 SUPERFAMILY Ubiquitin-like 10 93 IPR029071 -
Ahy19g1024 94 PANTHER AUTOPHAGY PROTEIN 12 1 94 IPR007242 GO:0000045|GO:0005737
Ahy19g1024 94 Gene3D - 5 94 - -
Ahy19g1024 94 CDD Ubl_ATG12 11 93 - -
Ahy19g1024 94 Pfam Ubiquitin-like autophagy protein Apg12 11 94 IPR007242 GO:0000045|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1024 Ahy-Chr19 16560506 16564206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1024 K08336 - csin:114265366 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1024 19 16560506 16564206 Ahy19g1024 19 16560506 16564206 ECH
Ahy19g1024 19 16560506 16564206 Ahy9g0783 9 12563008 12566658 hybridization