Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0947 ATGGCACAACGATCGCATGTACCAAAATTTGGCAATTGGGAAAGTGGAGAAAATGTTCCATATACAGCTTATTTTGACAAGGCTCGGAAAGATCGAACTGGCACGAAGATGATAAATCCGAATGACCCTGAGGAGAATTCGGATTTATCATTTTATAATTCATCATCTGATCAGCTACCTCCGGCCATACCCGGAACTGATTCAGAGCATCCATCTGGAAAGGGATCTAAGACATCCACACATGAGTTACAGAAGAGCAAGGAAGACAGTGATGCTAAGCCTTTTGTTGACTCTCCTGCTCGTCAAGCAAGCCAGGGAGTAGGTTCTGCCGATAACCGAAGAAGACCTTCTAGACAAAGTACTGGTTCTGAGTACAGCATCGAACGTTCTCCCCTTCATCGTCAGGCTAGAGCCCCTGGAAAGGATAGTCCATCATGGGAAGGAAAGAATTCCTATGATAGCAGCCATGGAACACCAGGAAGATCCCGGTTAAGACCAGCTAATCGGGGCGATGAGACTCCTGACAAAGGAGCAGCTGTTCCGAAGTTCGGCGAGTGGGATGTTAGTAACCCTGCATCGGCTGATGGCTACACTCACATTTTCAACCAAGTGAGGGAGGAGAGACAGGGTGGAGCTGGAGTTACGCCAGGCACACCTAATCAAAGACCACACTTTATCAAGAACCAACCTAGCAATGACAAAGCACAGTGTTGCTGCTTTTGGTGGAGCAACAAATGA 738 0.4729 MAQRSHVPKFGNWESGENVPYTAYFDKARKDRTGTKMINPNDPEENSDLSFYNSSSDQLPPAIPGTDSEHPSGKGSKTSTHELQKSKEDSDAKPFVDSPARQASQGVGSADNRRRPSRQSTGSEYSIERSPLHRQARAPGKDSPSWEGKNSYDSSHGTPGRSRLRPANRGDETPDKGAAVPKFGEWDVSNPASADGYTHIFNQVREERQGGAGVTPGTPNQRPHFIKNQPSNDKAQCCCFWWSNK* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0947 245 MobiDBLite consensus disorder prediction 74 95 - -
Ahy19g0947 245 MobiDBLite consensus disorder prediction 39 62 - -
Ahy19g0947 245 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 241 IPR040387 -
Ahy19g0947 245 MobiDBLite consensus disorder prediction 27 232 - -
Ahy19g0947 245 MobiDBLite consensus disorder prediction 102 128 - -
Ahy19g0947 245 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 241 - -
Ahy19g0947 245 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 174 209 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0947 Ahy-Chr19 14846277 14851672 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0947 K13456 - gmx:100808509 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0947 19 14846277 14851672 Ahy9g0721 9 11080632 11085928 hybridization