Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0931 ATGGGGAAAAAGAGGGGATCCGAAATGAACATTTTATTTGGATGGTTGATGAAGTTATCTATCAAAGTTAAAATCTTTTTGGGAACATTGGTTGTGCTTTGTGCTTTGGTGGCTCTAGGTTTTACCATCAAAGATCATGAATATTTCTTCATAGTCGCTGAAGCTGTTCATCTTGCTGGGACTATTGTCCTCTTATACAAGCTCTTCACCAAGAAAACTTGCTCTGGTTTATCACTTAAAACCCAAGAGATCACAGCTTTGTACCTATCAGGAAGATTAATTTGTGGCATGTTGTTGAGAAATGTTGTTGGCATCTACATGTACATTATGCTAGACTTGGTATTTCTCTTGTCAACATTACTCACAATATGGAAGATAAGGTTCAAATTGAAGTCCTCCTATATTAAAGAGCTTGACACTGTACGAGTGCCTTTTATGGTGGTGAGTTGTGCAATCCTTGCTATAATAATCCACCCGCGTTCAAGTGATTTTTCTTTCACCAACACCCTTTGGGCATTCTGTGTGTACTTGGAAGCCATTTCAGTTTTTCCTCAACTTCGTTTCATGCAAAATGCAAAGATGGTAGAAACATTTACAGGATATTATGTGTTTTCGCTTGGTATTTCAAGATTCTTGGCATTGGCTCAATGGATAATTCAGATCTATAAGACTCGAGGATCATATCTATTTTTGCTAGGTAGTGGCAATATTTGGTTCTTGACAGCCTTTCTAGCAGAAATGGTACAATCGTTTATCTTGGCTGATTTTTGTTACTATTACATAAAAAGCTTCAAACAAGGCCAACTTTTGAGGAAAATGCCAATTTAA 828 0.3696 MGKKRGSEMNILFGWLMKLSIKVKIFLGTLVVLCALVALGFTIKDHEYFFIVAEAVHLAGTIVLLYKLFTKKTCSGLSLKTQEITALYLSGRLICGMLLRNVVGIYMYIMLDLVFLLSTLLTIWKIRFKLKSSYIKELDTVRVPFMVVSCAILAIIIHPRSSDFSFTNTLWAFCVYLEAISVFPQLRFMQNAKMVETFTGYYVFSLGISRFLALAQWIIQIYKTRGSYLFLLGSGNIWFLTAFLAEMVQSFILADFCYYYIKSFKQGQLLRKMPI* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0931 275 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 274 - -
Ahy19g0931 275 Pfam ER lumen protein retaining receptor 73 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Ahy19g0931 275 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016021|GO:0046923
Ahy19g0931 275 PRINTS ER lumen protein retaining receptor signature 193 207 IPR000133 GO:0006621|GO:0016021|GO:0046923
Ahy19g0931 275 PRINTS ER lumen protein retaining receptor signature 171 191 IPR000133 GO:0006621|GO:0016021|GO:0046923
Ahy19g0931 275 PRINTS ER lumen protein retaining receptor signature 207 225 IPR000133 GO:0006621|GO:0016021|GO:0046923
Ahy19g0931 275 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016021|GO:0046923
Ahy19g0931 275 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 274 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0931 Ahy-Chr19 14602854 14607453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0931 1 275 Miscellaneous Gene Families AT3G25160 56.159 3.32e-108 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0931 - K10949 gmx:100790210 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0931 19 14602854 14607453 Ahy9g0692 9 10679431 10686276 hybridization