Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0914 ATGGCTCTGAACTTGCCCTCTCCAGCGCAAGTGAAGCCCTTCTTTTTCGCTTCTGATTCCCCAAAGCTTCCAGGAAGCTTTTCTTTGAAGAGAAAAGAAAATGAGACAACAGTAGAAAGAAGAATATGTTGCTCAGTGCAATCACCAGCACCAGCATGGCCAGGAACTGCTATTCCTGATCCTAATGCTAAAGTATGGGATGGACCAAAACCAATTTCTATCTTAGGATCTACAGGTTCAATTGGAACCCAGACACTGAATATAGTGGCTGAGTTTCCGGATAGATTTAAAGTGGTGGGGCTTGCAGCTGGTTCAAATGTTACTCTTCTTGCTGATCAGATAAAAACATTTAAGCCTGAACTTGTTGCTCTTAGAAATGAGTCTCTAATTGGTGAACTCAAAGAGGCTATTGCTGATTCCGATCACAAACCTGAAATCGTCGCCGGAGAACAAGGAGTCATTGAGGTTGCTCGCCACCCTGATGCAGCCACTGTAGTTACAGGAATAGTTGGTTGCGCAGGATTAAAGCCAACTGTTGCTGCCATAGAAGCAGGGAAAGACATAGCATTGGCCAACAAAGAGACAATGATTGCTGGAGGCGCCTTTGTTCTTCCTCTTGCTCACAAACATAACATCAAAATTCTTCCAGCTGATTCAGAACATTCTGCCATCTTTCAGTGTATCCAGGGGTTGCCAAAGGGTGCACTTAGGAAAGTAATTTTGACTGGATCTGGAGGTGCTTTCAGGGAATGGCCAAAGGAAAAGATGAAAGAAATTAAACTTGCTGATGCACTAAAGCATCCTATCTGGAGTTTGGGAAGAAAGATAACTATTGACTCAGCTACCCTTTTCAATAAGGGTCTGGAGGTAATTGAAGCACATTATTTGTTTGGAGCTGAATATGATGATATTGAGATTGTTATTCATCCACAATCTATCATACATGGAATGATTGAAACTCAGGACTCATCTGTTATTTCACAGTTGGGGTTACCAGATATGCGTTTGCCTCTCCTCTACACATTGTCATGGCCAGAAAGAGTCCCTTGTTCTGAAGTAACTTGGCCCCGTCTTGATCTTAGCAAGTATGGTTCCCTAACATTTCAAGCACCAGACACTGATAAGTTCCCATCTGTGAATCTTTGCTATGCTGCTGGACGTGCCGGAGGAACAATGACTGGAGTTCTCAGTGCAGCAAATGAGAAAGCTGTTGAATTATTTGTTGAAGAAAAGATTACCTATCTGGATATTTTCAAGGTTGTGGAGTTAACATGCGAAGCGCATCAGAAAGAATTGGTGCCGTCTCCTTCACTTGAGGAAATCCTTCACTATGACCAGTGGGCGCGACAATATGCTGCTGGTCTGCAAATAGCTTCAAGTATTTGA 1386 0.4293 MALNLPSPAQVKPFFFASDSPKLPGSFSLKRKENETTVERRICCSVQSPAPAWPGTAIPDPNAKVWDGPKPISILGSTGSIGTQTLNIVAEFPDRFKVVGLAAGSNVTLLADQIKTFKPELVALRNESLIGELKEAIADSDHKPEIVAGEQGVIEVARHPDAATVVTGIVGCAGLKPTVAAIEAGKDIALANKETMIAGGAFVLPLAHKHNIKILPADSEHSAIFQCIQGLPKGALRKVILTGSGGAFREWPKEKMKEIKLADALKHPIWSLGRKITIDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHGMIETQDSSVISQLGLPDMRLPLLYTLSWPERVPCSEVTWPRLDLSKYGSLTFQAPDTDKFPSVNLCYAAGRAGGTMTGVLSAANEKAVELFVEEKITYLDIFKVVELTCEAHQKELVPSPSLEEILHYDQWARQYAAGLQIASSI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0914 461 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 72 200 IPR013512 GO:0070402
Ahy19g0914 461 Pfam DXP reductoisomerase C-terminal domain 329 450 IPR026877 -
Ahy19g0914 461 Gene3D - 374 457 - -
Ahy19g0914 461 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 70 452 IPR003821 GO:0008299|GO:0030604|GO:0046872
Ahy19g0914 461 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 362 454 IPR036169 -
Ahy19g0914 461 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 194 332 - -
Ahy19g0914 461 Gene3D - 64 218 - -
Ahy19g0914 461 PIRSF Dxp_reductoisomrs 69 460 IPR003821 GO:0008299|GO:0030604|GO:0046872
Ahy19g0914 461 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 72 455 IPR003821 GO:0008299|GO:0030604|GO:0046872
Ahy19g0914 461 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 69 218 IPR036291 -
Ahy19g0914 461 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 214 297 IPR013644 GO:0005515
Ahy19g0914 461 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 461 IPR003821 GO:0008299|GO:0030604|GO:0046872
Ahy19g0914 461 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0914 Ahy-Chr19 14171884 14179786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0914 K00099 - gmx:100805316 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0914 19 14171884 14179786 Ahy9g0672 9 10242193 10250383 hybridization