Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0838 ATGGCCTCCAAACCTGGCTTTCTCACTGATTGGCCATGGAAGCCTCTTGGAAGTTTTAAGTGGGTGATTTTGACACCATGGATAGCACACAGCACCTACTCTTTCATAACGAAGGATCAAAATGAAAGAGACATTGGATACTTTCTAATATTTCCATATATGATGTTGAGAATGCTCCATGATCAAGCTTGGATCACTCTTTCTCGCCACAGAACCTCCAAAGGCAAAAGCAGAATCCTTGACAAAGGAATTGAGTTTGAACAAGTTGATCGAGAAAGCAATTGGGATGACCAGATATTGTTGAATGGGTTATTATTCTACATAGGTTACATGTTGGTTCCAGAAGGTTCTCACCTACCAATATGGAAAACAGATGGTGTTATTATTACAACTCTGTTGCATGCTGGACCTGTTGAGTTTCTCTATTATTGGTTGCATAGGGCACTCCATCACCATTTTCTCTATTCCAGATACCATTCTCATCACCATTCCTCCATTGTCACTGAACCCATCACTTCTGTGATCCATCCATTTGCAGAGCACATAGCATATTTTGTGTTATTTGCAATTCCACTTTACACAACAGTGATTACAAGGACAGCTTCCATTGCATCCTTCGCTGGCTATTTGGCCTACATTGACTTTATGAATAATATGGGTCATTGCAACTTTGAGTTCATTCCAACCACCCTTTTCTCCTTCTTTCCCTTCCTCAAATTTCTCATCTATACTCCTTCGTTCCACTCATTGCACCACACACAATTCAGAACTAATTACTCACTTTTCATGCCAATTTATGATTACGTGTATGGAACAATGGACAAGAGTTCAGACAAAACATATGAAATGTCACTGAAGAGAGAAGAAGGTTCAGTAGATGTGGTGCACCTAACACACCTTACAACCCCAGAATCAATATATTATCTTAGGTTGGGGTTTTCTTCATTAGCATCCACACCACAATCTTCAAAATGGTACCTCTATTTGCTGTGGCCACTGACACTTTGGACTTCTTTGATGACTTGGTTTTATGGCAAAACATTTGTTTTGGAGAGGAACAATTTCAAAATGCTCAATTTGCAATCTTGGGTTATACCAAGATTCCATGTTCAATATTTCTTCAAATGGCAAAGAGAAGCATTAAACAAACTGATAGAGGAAGCAATACTTGAGGCAGAGTTGAGAGGAGTTAAGGTTTTAACTCTTGGTCTTTTGAACCAGGGAGATAAGCTTAATAAACTTGGTGAGATTTACATAAAGAGCTATCCGCAGCTTAAGATAAAGATTGTTGATGGAAGTAGCTTAGTTGTGGCTATTGTTCTTAATAACATTCCCAAAGAAACAACTCAAGTGCTTCTTTCTGGTAAACTTACCAAGATTTCATATGCTATTGTCAGTGCTTTATGTGAAAGGGGTACCAAGGTTACAACAATGTACAAGGATGATTATGATAATCTTCAATCAAAGCTCTGCTCTGAGTCCAAAAAGAATTTGGTTTTCCCAGGATCCTACACTGCAAAGATATGGTTAGTAGGAGATCAAATTAACGAGGCTGAACAGAAAAAGGCACCAAAAGGAACATTGTTCATACCTTTTACCCAATTTCCTCCAAAGAAACTTCGCAAAGATTGTTTCTATCATACCACACCATCCATGCTAGCTCCCTCTTCTTTAGTTAACGTACATTCCTGTGAGAATTGGCTGCCAAGAAGGGTGATGAGTGCATGGCGTATTGCAGGGATATTGCATGCCTTAGAAAAATGGGATGTTAATGAGTGTGGAGATGCTATGTTTAGCATTGAGAAAATATGGCAAGCAAGTATTCATCATGGGTTTAGGCCATTAAAAATAAATCCTCTTATTAAAATTTAA 1872 0.3851 MASKPGFLTDWPWKPLGSFKWVILTPWIAHSTYSFITKDQNERDIGYFLIFPYMMLRMLHDQAWITLSRHRTSKGKSRILDKGIEFEQVDRESNWDDQILLNGLLFYIGYMLVPEGSHLPIWKTDGVIITTLLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFVLFAIPLYTTVITRTASIASFAGYLAYIDFMNNMGHCNFEFIPTTLFSFFPFLKFLIYTPSFHSLHHTQFRTNYSLFMPIYDYVYGTMDKSSDKTYEMSLKREEGSVDVVHLTHLTTPESIYYLRLGFSSLASTPQSSKWYLYLLWPLTLWTSLMTWFYGKTFVLERNNFKMLNLQSWVIPRFHVQYFFKWQREALNKLIEEAILEAELRGVKVLTLGLLNQGDKLNKLGEIYIKSYPQLKIKIVDGSSLVVAIVLNNIPKETTQVLLSGKLTKISYAIVSALCERGTKVTTMYKDDYDNLQSKLCSESKKNLVFPGSYTAKIWLVGDQINEAEQKKAPKGTLFIPFTQFPPKKLRKDCFYHTTPSMLAPSSLVNVHSCENWLPRRVMSAWRIAGILHALEKWDVNECGDAMFSIEKIWQASIHHGFRPLKINPLIKI* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0838 623 Pfam Fatty acid hydroxylase 137 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Ahy19g0838 623 Pfam WAX2 C-terminal domain 451 614 IPR021940 -
Ahy19g0838 623 PANTHER STEROL DESATURASE 1 617 - -
Ahy19g0838 623 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0838 Ahy-Chr19 12213383 12224280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0838 1 620 Lipid Metabolism Gene Families AT1G02190 56.190 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0838 K15404 - gmx:100790115 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0838 19 12213383 12224280 Ahy19g0838 19 12213383 12224280 ECH
Ahy19g0838 19 12213383 12224280 Ahy2g0060 2 691299 704170 hybridization