Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0797 ATGGGACAAATCCTCGACAAGCTTCAGGGTAAGGAGTGGAGGCGAAAGCAAATAAGGAAGATTACAGATCGAGTTTTTGATGGCGTGAAGAATGAGACGGGAAGGGCTAATTTGAAATTTGAAGATCTGTATATTGCTGTTTTGATTGTGTACAATGATATCAACAAGCATTTGCCTGGTCCACATTTTGATCCTCCACCAAAAGACAAAGTCAGAGAGATGATGCAGAATTGTGATATCAACCTTGACGGGGAAATCGATCGGGAAGAGTTTTACAATTTCATCAAGCAGTTGACTGCTGATACTTTCATCATTGTTAGTCAAAAGCTTATTATCACTTTGGCTGTAGCACCAGCTGTTGCATTGGCAACAAAGAGAAGCACTGAAAAGGTCCCTGGTGTTGGGAATGTGGTGCAAAAGATACCAAATTCGGTTTATGCTTCACTTGTGACCCTTGCAGTTGTGTGGTTCCAAAAACAGACCTTCGGAGATGATCCAAAGTACTAG 507 0.4162 MGQILDKLQGKEWRRKQIRKITDRVFDGVKNETGRANLKFEDLYIAVLIVYNDINKHLPGPHFDPPPKDKVREMMQNCDINLDGEIDREEFYNFIKQLTADTFIIVSQKLIITLAVAPAVALATKRSTEKVPGVGNVVQKIPNSVYASLVTLAVVWFQKQTFGDDPKY* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0797 168 PANTHER CALCIUM-BINDING EF HAND PROTEIN 4 161 - -
Ahy19g0797 168 SMART efh_1 70 98 IPR002048 GO:0005509
Ahy19g0797 168 Gene3D - 16 99 - -
Ahy19g0797 168 PANTHER S100 CALCIUM-BINDING PROTEIN 4 161 - -
Ahy19g0797 168 SUPERFAMILY EF-hand 62 95 IPR011992 -
Ahy19g0797 168 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0797 Ahy-Chr19 11450542 11454519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0797 1 156 EF-hand Containing Proteins AT1G64850 71.154 8.69e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0797 - - adu:107472679 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0797 19 11450542 11454519 Ahy2g0086 2 993367 997218 hybridization