Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0786 ATGTCGCAACAACAACAGCAGAACAGCAACATACCAGTGAGCGAGGTTTTCTGGACTCTCGCTGATAAAGCCGACAAGAAGTTCTCCAACATCAGAGACTTGCCTTATTACCAGCGCTCTAGGCATGATACATACTTTTATAAGGTGTTCAAGGTGTACACACAATTGTGGAAGTTTCAACAGGAGAACCGGCAGAAGCTGGTAGAAGCAGGGCTAAAAAGATGGGAGATTGGTGACATTGCATCTCGCATTGGACAGCTATATTTTGGGCAGTATATGCGCACAAGTGAGGCGAATTATCTATCAGAGTCATACATATTCTATGAAGCCATATTGACGAGGGAGTATTTTAAGGAGGGGCTGTTTCAAGATGTGAATATTGCAAACAAACAATTGAGGTTTCTTGCACGGTTCCTGATGGTGTGTTTGGTCTTAAACCGAAGGGAAATGGTGCAGCAATTGGTTAATCAGCTTAAAGTATTAGTAGATGAATGCAAGAGGACATTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGCTTCAAGAAATAGTCAAATTTTTAAAAGCTGACACAGCTTTTATCAATATCAGACCCTTGAGATACAGTCTAGTTTTGGACCCTCATCCAGATACTTTACCACATGTTGCTGCAGCTATCACAAAACGAAGTTTAAAATTAAGAGATGCTGTCTTAAGTAGTTTCCATCCAAATGAGGTTAAGTTTTCAGATATTACTCTCGACACTTTTCGGATGCTTCAATGCCTGGAGTGGGAACCTAGTGGCTCATTTTACCAGTCTACTGGTTCAAAACTTGGTCAGAATGGAGCCACTGGGGCTAGTCGTATTAGTTACTCCCAAGAAATTGCTGATCCTACCTTACCTGCAAATCCACGGAAAGCTGTGTTATACCGTCCATCATTAACCCATTTTGTAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTATACTTGTCGGCTTCAGGATCTTGCACTGCTGCAAAGAATGAATCTGGTTGTATACCCCTTGGTCCTCGCGGAGATGGAGGACCAAACTGTGTATACCCATCTGACTTTCTACCATTTACAAGAAGACCACTTCTTCTGGTCATCGATAATGATAACAGCAAAGCATTTAAGGTTATATCCGGAGCCGAAAAGGGAGAATCGATTGCTATGCTCCTTTCTCCAAGCTGTTCACCTTCAATTGCATCTGATTCTTCCTCTCATATTTCAAATGGTAGTATATTCACCATGTTTCTTACCGCTCCCCTGCAAGCTTTCTGTCTGCTGCTAGGATTTTCAGGCACTGATATTGATTTGGACAAATATAACAATGCTGAAATGCTGCTCTCATCTTCATTAAACAACTGGGGAGCTGTGTTGGCGACCACGGACACACTCAATCCTGTATGGGGACAGGTTTTAGGTGATCCCTTTATAAGGAGAATTCTTTTAAGATTCATGTTTTGTGAAGCAGTATTGACCTTGTACACTCCAGCTCAAGACAAAAGTGAGTTCCTTCCGACATGTGTCCCTTCTCTTCCAACGCCTGTCCTGCCACCAAATTATTCCTATCAGAATGTAATTCTGCAACTCGCCGGAATTTTCGGTGCAACTAAGTATTTCGTCTTCTCAGAGGATGATCTTGCTGACAAAACACAAACAAACCTGGAGTTGTAG 1704 0.4219 MSQQQQQNSNIPVSEVFWTLADKADKKFSNIRDLPYYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLVEAGLKRWEIGDIASRIGQLYFGQYMRTSEANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFLMVCLVLNRREMVQQLVNQLKVLVDECKRTFQESDFKEWKLVLQEIVKFLKADTAFINIRPLRYSLVLDPHPDTLPHVAAAITKRSLKLRDAVLSSFHPNEVKFSDITLDTFRMLQCLEWEPSGSFYQSTGSKLGQNGATGASRISYSQEIADPTLPANPRKAVLYRPSLTHFVAVLATICEELPSDGILLVYLSASGSCTAAKNESGCIPLGPRGDGGPNCVYPSDFLPFTRRPLLLVIDNDNSKAFKVISGAEKGESIAMLLSPSCSPSIASDSSSHISNGSIFTMFLTAPLQAFCLLLGFSGTDIDLDKYNNAEMLLSSSLNNWGAVLATTDTLNPVWGQVLGDPFIRRILLRFMFCEAVLTLYTPAQDKSEFLPTCVPSLPTPVLPPNYSYQNVILQLAGIFGATKYFVFSEDDLADKTQTNLEL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0786 567 PANTHER PROTEIN SCAI 341 562 - -
Ahy19g0786 567 PANTHER PROTEIN SCAI 3 341 - -
Ahy19g0786 567 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 341 562 - -
Ahy19g0786 567 Pfam Protein SCAI 20 343 IPR022709 GO:0003714|GO:0006351
Ahy19g0786 567 Pfam Protein SCAI 344 506 IPR022709 GO:0003714|GO:0006351
Ahy19g0786 567 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 3 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0786 Ahy-Chr19 11319566 11326648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0786 - - gmx:100810202 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0786 19 11319566 11326648 Ahy19g0786 19 11319566 11326648 ECH
Ahy19g0786 19 11319566 11326648 Ahy2g0116 2 1281284 1288202 hybridization