Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0781 ATGGCTGAAGTAGTGAGGAACAAGAGGGTTGTTCTGAGGAACTATGTCACTGGTTTCCCCAAAGAATCAGACATGGAAATTGTGGAAGGAACCATAACTTTGAAGGTTCCAGAAGGTTCCAAGGAGGTGCTGCTCAAGAACCTCTACTTGTCATGTGATCCTTTCATGAGGAATCTCATGAACAAGCCCCAAGGCACTGAGACCAGCAGTGGCCTTAACTATACTTCTGGATCTGCAATAGGTGGGTTTGGTGTGTCCAAGGTGATAGATTCTGGAAGCCCAGATTATAAGTATGGGGATTTAGTATGGGGGCTTACTAAATGGGAGGAGTACAGCTTGGTCCCTTCATCTCAAATAATCTCCAAAATTCAGCACACTGATGGTGTTCCACTTTCTTACTATACTGGAATTCTTGGCATGCCAGGAGTGACTGCTTATGCAGGTCTCTTTGAAGTAGGCTCTCTCCAAAAAGGGGAGAGAGTTTTCGTTTCGGCTGCTTCCGGCGCAGTCGGCCAACTTGTCGGACAATTCGCTAAACTTACAGATTGTTATGTTGTGGGAAGTGCTGGAAGTAAAGACAAGGTGGATCTGTTAAAGAATAAATTTGGATTTGATGAAGGTTTTAACTATAAAGAAGAGCCTGACCTCAATGCAGCTTTGAAGAGGTATTTTCCGGAAGGCATTGATGTTTACTTTGAGAATGTGGGAGGAAAGACGCTTGATGCCGTGCTCCTCAACATGAGAGTCCAGGGTCGCATACCGGCTTGTGGAATGATATCGCAGTATAATCTAACTCAACCGGAAGGTGTAACGAATTTGGCTAACATTGTATATAAGAAGATTCGTATGCAGGGTTTTCATTTCTTCGATTATGTTAACCTGTATCCAAAATTCTTGGAGTTTGTCCTCTCTCATCTCAAAGAAGGGAAGATTGTTTATGTGGAAGACATAGCTGAAGGTCTTGAGAACGGCCCTGCAGCCTTGGTTGGCCTTTTTAGCGGTCGCAATTTCGGAAAACAAGTGCTTCTTGTTGCTCCTGAATAA 1044 0.4387 MAEVVRNKRVVLRNYVTGFPKESDMEIVEGTITLKVPEGSKEVLLKNLYLSCDPFMRNLMNKPQGTETSSGLNYTSGSAIGGFGVSKVIDSGSPDYKYGDLVWGLTKWEEYSLVPSSQIISKIQHTDGVPLSYYTGILGMPGVTAYAGLFEVGSLQKGERVFVSAASGAVGQLVGQFAKLTDCYVVGSAGSKDKVDLLKNKFGFDEGFNYKEEPDLNAALKRYFPEGIDVYFENVGGKTLDAVLLNMRVQGRIPACGMISQYNLTQPEGVTNLANIVYKKIRMQGFHFFDYVNLYPKFLEFVLSHLKEGKIVYVEDIAEGLENGPAALVGLFSGRNFGKQVLLVAPE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0781 347 SMART PKS_ER_names_mod 43 342 IPR020843 GO:0016491
Ahy19g0781 347 PANTHER PROSTAGLANDIN REDUCTASE 4 345 IPR045010 GO:0016628
Ahy19g0781 347 Gene3D - 137 313 - -
Ahy19g0781 347 Pfam Zinc-binding dehydrogenase 169 302 IPR013149 -
Ahy19g0781 347 Pfam N-terminal domain of oxidoreductase 8 118 IPR041694 -
Ahy19g0781 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 136 305 IPR036291 -
Ahy19g0781 347 SUPERFAMILY GroES-like 287 342 IPR011032 -
Ahy19g0781 347 SUPERFAMILY GroES-like 4 174 IPR011032 -
Ahy19g0781 347 CDD double_bond_reductase_like 5 344 - -
Ahy19g0781 347 Gene3D - 10 342 - -
Ahy19g0781 347 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 4 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0781 Ahy-Chr19 11244974 11248311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0781 K19825 - gmx:100809668 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0781 19 11244974 11248311 Ahy2g0118 2 1306275 1310516 hybridization